Gene Information

Name : ABK1_2018 (ABK1_2018)
Accession : YP_005514590.1
Strain : Acinetobacter baumannii 1656-2
Genome accession: NC_017162
Putative virulence/resistance : Resistance
Product : Beta-lactamase class D (Beta-lactamase OXA-109)
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2132285 - 2133109 bp
Length : 825 bp
Strand : -
Note : -

DNA sequence : 
ATGAACATTAAAGCACTCTTACTTATAACAAGCGCTATTTTTATTTCAGCCTGCTCACCTTATATAGTGACTGCTAATCC
AAATCACAGCGCTTCAAAATCTGATGTAAAAGCAGAGAAAATTAAAAATTTATTTAACGAAGCACACACTACGGGTGTTT
TAGTTATCCAACAAGGCCAAACTCAACAAAGCTATGGTAATGATCTTGCTCGTGCTTCGACCGAGTATGTACCTGCTTCG
ACCTTCAAAATGCTTAATGCTTTGATCGGCCTTGAGCACCATAAGGCAACCACCACAGAAGTATTTAAGTGGGATGGTAA
AAAAAGGTTATTCCCAGAATGGGAAAAGGACATGACCCTAGGCGATGCCATGAAAGCTTCCGCTATTCAAGTTTATCAAG
ATTTAGCTCGTCGTATTGGACTTGAGCTCATGTCTAAGGAAGTGAAGCGTGTTGGTTATGGCAATGCAGATATCGGTACC
CAAGTCGATAATTTTTGGCTGGTGGGTCCTTTAAAAATTACTCCTCAGCAAGAGGCACAGTTTGCTTACAAGCTAGCTAA
TAAAACGCTTCCATTTAGCCAAAAAGTCCAAGATGAAGTGCAATCCATGCTATTCATAGAAGAAAAGAATGGAAACAAAA
TATACGCAAAAAGTGGTTGGGGATGGGATGTAAACCCACAAGTAGGCTGGTTAACTGGATGGGTTGTTCAGCCTCAAGGG
AATATTGTAGCGTTCTCCCTTAACTTAGAAATGAAAAAAGGAATACCTAGCTCTGTTCGAAAAGAGATTACTTATAAAAG
CTTAGAACAATTAGGTATTTTATAG

Protein sequence : 
MNIKALLLITSAIFISACSPYIVTANPNHSASKSDVKAEKIKNLFNEAHTTGVLVIQQGQTQQSYGNDLARASTEYVPAS
TFKMLNALIGLEHHKATTTEVFKWDGKKRLFPEWEKDMTLGDAMKASAIQVYQDLARRIGLELMSKEVKRVGYGNADIGT
QVDNFWLVGPLKITPQQEAQFAYKLANKTLPFSQKVQDEVQSMLFIEEKNGNKIYAKSGWGWDVNPQVGWLTGWVVQPQG
NIVAFSLNLEMKKGIPSSVRKEITYKSLEQLGIL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
oxa-Ab ACV89830.1 carbapenem-hydrolyzing oxacillinase OXA-69 Not tested AbaR6 Protein 8e-124 99
oxa-Ab ACV89832.1 carbapenem-hydrolyzing oxacillinase OXA-69 Not tested AbaR7 Protein 8e-124 99
oxa-Ab ADK35783.1 carbapenem-hydrolyzing oxacillinase OXA-69 Not tested AbaR8 Protein 8e-124 99
BJAB0715_00989 YP_008216137.1 Beta-lactamase class D Not tested AbaR27 Protein 3e-79 58
oxa23 AEO37447.1 class D beta-lactamase OXA-23 Not tested AbaR4 Protein 3e-79 58
oxa-23 AFV47968.1 class D beta-lactamase OXA-23 Not tested AbaR25 Protein 2e-79 58
oxa-23 AFV47996.1 class D beta-lactamase OXA-23 Not tested delta-AbaR25 Protein 2e-79 58
oxa23 AEZ06035.1 OXA-23 class D beta-lactamase Not tested Tn6167 Protein 9e-79 58
bla(Oxa-23) AFH57213.1 carbapenemase Not tested AbaR4b Protein 2e-79 58

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ABK1_2018 YP_005514590.1 Beta-lactamase class D (Beta-lactamase OXA-109) EF650035.1.gene1.p01 Protein 6e-126 100
ABK1_2018 YP_005514590.1 Beta-lactamase class D (Beta-lactamase OXA-109) HM113563.1.gene1.p01 Protein 1e-124 99
ABK1_2018 YP_005514590.1 Beta-lactamase class D (Beta-lactamase OXA-109) HQ425494.1.gene1.p01 Protein 6e-124 99
ABK1_2018 YP_005514590.1 Beta-lactamase class D (Beta-lactamase OXA-109) EU019535.1.gene1.p01 Protein 3e-125 99
ABK1_2018 YP_005514590.1 Beta-lactamase class D (Beta-lactamase OXA-109) HQ425495.1.gene1.p01 Protein 2e-124 99
ABK1_2018 YP_005514590.1 Beta-lactamase class D (Beta-lactamase OXA-109) HQ425493.1.gene1.p01 Protein 3e-123 99
ABK1_2018 YP_005514590.1 Beta-lactamase class D (Beta-lactamase OXA-109) AY750908.1.gene1.p01 Protein 8e-125 99
ABK1_2018 YP_005514590.1 Beta-lactamase class D (Beta-lactamase OXA-109) NC_011595.7059224.p0 Protein 5e-124 99
ABK1_2018 YP_005514590.1 Beta-lactamase class D (Beta-lactamase OXA-109) HQ734813.1.gene1.p01 Protein 3e-125 99
ABK1_2018 YP_005514590.1 Beta-lactamase class D (Beta-lactamase OXA-109) EU547445.1.gene1.p1 Protein 1e-124 99
ABK1_2018 YP_005514590.1 Beta-lactamase class D (Beta-lactamase OXA-109) HM113564.1.gene1.p01 Protein 8e-125 99
ABK1_2018 YP_005514590.1 Beta-lactamase class D (Beta-lactamase OXA-109) EU019534.1.gene1.p01 Protein 5e-124 99
ABK1_2018 YP_005514590.1 Beta-lactamase class D (Beta-lactamase OXA-109) AB634250.1.gene1.p01 Protein 2e-125 99
ABK1_2018 YP_005514590.1 Beta-lactamase class D (Beta-lactamase OXA-109) DQ392963.1.gene1.p01 Protein 1e-124 99
ABK1_2018 YP_005514590.1 Beta-lactamase class D (Beta-lactamase OXA-109) HM570035.1.gene1.p01 Protein 7e-124 99
ABK1_2018 YP_005514590.1 Beta-lactamase class D (Beta-lactamase OXA-109) HM113561.1.gene1.p01 Protein 5e-125 99
ABK1_2018 YP_005514590.1 Beta-lactamase class D (Beta-lactamase OXA-109) DQ519088.1.gene1.p01 Protein 4e-124 99
ABK1_2018 YP_005514590.1 Beta-lactamase class D (Beta-lactamase OXA-109) HM113560.1.gene1.p01 Protein 1e-124 99
ABK1_2018 YP_005514590.1 Beta-lactamase class D (Beta-lactamase OXA-109) DQ309276.1.gene1.p01 Protein 4e-125 99
ABK1_2018 YP_005514590.1 Beta-lactamase class D (Beta-lactamase OXA-109) EF581285.1.gene1.p01 Protein 2e-124 99
ABK1_2018 YP_005514590.1 Beta-lactamase class D (Beta-lactamase OXA-109) EU547446.1.gene1.p1 Protein 1e-124 99
ABK1_2018 YP_005514590.1 Beta-lactamase class D (Beta-lactamase OXA-109) AY750911.1.gene1.p01 Protein 5e-124 99
ABK1_2018 YP_005514590.1 Beta-lactamase class D (Beta-lactamase OXA-109) DQ309277.1.gene1.p01 Protein 3e-125 99
ABK1_2018 YP_005514590.1 Beta-lactamase class D (Beta-lactamase OXA-109) HM113558.1.gene1.p01 Protein 2e-124 99
ABK1_2018 YP_005514590.1 Beta-lactamase class D (Beta-lactamase OXA-109) EU029998.1.gene2.p01 Protein 8e-125 99
ABK1_2018 YP_005514590.1 Beta-lactamase class D (Beta-lactamase OXA-109) DQ519089.1.gene1.p01 Protein 5e-124 99
ABK1_2018 YP_005514590.1 Beta-lactamase class D (Beta-lactamase OXA-109) AY750909.1.gene1.p01 Protein 2e-125 99
ABK1_2018 YP_005514590.1 Beta-lactamase class D (Beta-lactamase OXA-109) HQ425492.1.gene1.p01 Protein 1e-124 99
ABK1_2018 YP_005514590.1 Beta-lactamase class D (Beta-lactamase OXA-109) HM113559.1.gene1.p01 Protein 2e-123 99
ABK1_2018 YP_005514590.1 Beta-lactamase class D (Beta-lactamase OXA-109) HM113562.1.gene1.p01 Protein 7e-125 99
ABK1_2018 YP_005514590.1 Beta-lactamase class D (Beta-lactamase OXA-109) HQ734812.1.gene1.p01 Protein 1e-125 99
ABK1_2018 YP_005514590.1 Beta-lactamase class D (Beta-lactamase OXA-109) AM231719.1.gene1.p01 Protein 1e-124 99
ABK1_2018 YP_005514590.1 Beta-lactamase class D (Beta-lactamase OXA-109) HM570036.1.gene1.p01 Protein 6e-124 99
ABK1_2018 YP_005514590.1 Beta-lactamase class D (Beta-lactamase OXA-109) HQ734811.1.gene1.p01 Protein 2e-123 99
ABK1_2018 YP_005514590.1 Beta-lactamase class D (Beta-lactamase OXA-109) EU019536.1.gene1.p01 Protein 4e-125 99
ABK1_2018 YP_005514590.1 Beta-lactamase class D (Beta-lactamase OXA-109) GQ853681.1.gene1.p1 Protein 2e-123 98
ABK1_2018 YP_005514590.1 Beta-lactamase class D (Beta-lactamase OXA-109) EU375515.1.gene1.p1 Protein 1e-122 98
ABK1_2018 YP_005514590.1 Beta-lactamase class D (Beta-lactamase OXA-109) DQ519087.1.gene1.p01 Protein 9e-124 98
ABK1_2018 YP_005514590.1 Beta-lactamase class D (Beta-lactamase OXA-109) DQ385606.gene.p01 Protein 1e-123 98
ABK1_2018 YP_005514590.1 Beta-lactamase class D (Beta-lactamase OXA-109) FJ872530.1.gene1.p01 Protein 8e-123 98
ABK1_2018 YP_005514590.1 Beta-lactamase class D (Beta-lactamase OXA-109) AY750913.1.gene1.p01 Protein 8e-124 98
ABK1_2018 YP_005514590.1 Beta-lactamase class D (Beta-lactamase OXA-109) DQ491200.1.gene1.p01 Protein 3e-123 98
ABK1_2018 YP_005514590.1 Beta-lactamase class D (Beta-lactamase OXA-109) AY750907.1.gene1.p01 Protein 1e-123 98
ABK1_2018 YP_005514590.1 Beta-lactamase class D (Beta-lactamase OXA-109) JN215211.1.gene1.p01 Protein 3e-123 98
ABK1_2018 YP_005514590.1 Beta-lactamase class D (Beta-lactamase OXA-109) AY750910.1.gene1.p01 Protein 2e-123 98
ABK1_2018 YP_005514590.1 Beta-lactamase class D (Beta-lactamase OXA-109) EU220745.1.gene1.p01 Protein 8e-118 98
ABK1_2018 YP_005514590.1 Beta-lactamase class D (Beta-lactamase OXA-109) EF650036.1.gene1.p01 Protein 1e-123 98
ABK1_2018 YP_005514590.1 Beta-lactamase class D (Beta-lactamase OXA-109) GQ853679.1.gene1.p1 Protein 3e-123 98
ABK1_2018 YP_005514590.1 Beta-lactamase class D (Beta-lactamase OXA-109) AM279652.1.gene1.p01 Protein 6e-124 98
ABK1_2018 YP_005514590.1 Beta-lactamase class D (Beta-lactamase OXA-109) AY750912.1.gene1.p01 Protein 2e-123 98
ABK1_2018 YP_005514590.1 Beta-lactamase class D (Beta-lactamase OXA-109) JN248564.1.gene1.p01 Protein 1e-122 98
ABK1_2018 YP_005514590.1 Beta-lactamase class D (Beta-lactamase OXA-109) DQ519086.1.gene2.p01 Protein 9e-124 98
ABK1_2018 YP_005514590.1 Beta-lactamase class D (Beta-lactamase OXA-109) DQ335566.1.gene1.p01 Protein 3e-123 98
ABK1_2018 YP_005514590.1 Beta-lactamase class D (Beta-lactamase OXA-109) EF653400.1.gene1.p01 Protein 1e-123 98
ABK1_2018 YP_005514590.1 Beta-lactamase class D (Beta-lactamase OXA-109) EF650032.1.gene1.p01 Protein 9e-124 98
ABK1_2018 YP_005514590.1 Beta-lactamase class D (Beta-lactamase OXA-109) EU547447.1.gene1.p1 Protein 3e-123 98
ABK1_2018 YP_005514590.1 Beta-lactamase class D (Beta-lactamase OXA-109) AJ309734.2.gene1.p01 Protein 1e-123 98
ABK1_2018 YP_005514590.1 Beta-lactamase class D (Beta-lactamase OXA-109) GQ853680.1.gene1.p1 Protein 5e-123 98
ABK1_2018 YP_005514590.1 Beta-lactamase class D (Beta-lactamase OXA-109) EF650038.1.gene1.p01 Protein 7e-124 98
ABK1_2018 YP_005514590.1 Beta-lactamase class D (Beta-lactamase OXA-109) HQ998857.1.gene1.p01 Protein 5e-124 98
ABK1_2018 YP_005514590.1 Beta-lactamase class D (Beta-lactamase OXA-109) JN603240.1.gene1.p1 Protein 1e-123 98
ABK1_2018 YP_005514590.1 Beta-lactamase class D (Beta-lactamase OXA-109) AY862132.1.gene1.p01 Protein 3e-123 98
ABK1_2018 YP_005514590.1 Beta-lactamase class D (Beta-lactamase OXA-109) EU220744.1.gene1.p01 Protein 4e-118 98
ABK1_2018 YP_005514590.1 Beta-lactamase class D (Beta-lactamase OXA-109) EF650034.1.gene1.p01 Protein 3e-124 98
ABK1_2018 YP_005514590.1 Beta-lactamase class D (Beta-lactamase OXA-109) EF650033.1.gene1.p01 Protein 1e-123 98
ABK1_2018 YP_005514590.1 Beta-lactamase class D (Beta-lactamase OXA-109) EF650037.1.gene1.p01 Protein 3e-123 98
ABK1_2018 YP_005514590.1 Beta-lactamase class D (Beta-lactamase OXA-109) DQ888718.1.gene1.p01 Protein 1e-122 97
ABK1_2018 YP_005514590.1 Beta-lactamase class D (Beta-lactamase OXA-109) NC_012813.7996741.p0 Protein 5e-82 65
ABK1_2018 YP_005514590.1 Beta-lactamase class D (Beta-lactamase OXA-109) NC_013506.8571544.p0 Protein 5e-82 65
ABK1_2018 YP_005514590.1 Beta-lactamase class D (Beta-lactamase OXA-109) AM991978.1.gene1.p01 Protein 2e-81 65
ABK1_2018 YP_005514590.1 Beta-lactamase class D (Beta-lactamase OXA-109) AF201827.1.gene1.p01 Protein 6e-82 65
ABK1_2018 YP_005514590.1 Beta-lactamase class D (Beta-lactamase OXA-109) AJ239129.2.gene1.p01 Protein 5e-82 65
ABK1_2018 YP_005514590.1 Beta-lactamase class D (Beta-lactamase OXA-109) NC_013277.8458023.p0 Protein 5e-82 65
ABK1_2018 YP_005514590.1 Beta-lactamase class D (Beta-lactamase OXA-109) EF534256.2.gene1.p01 Protein 2e-82 65
ABK1_2018 YP_005514590.1 Beta-lactamase class D (Beta-lactamase OXA-109) AF201826.1.gene1.p01 Protein 1e-81 65
ABK1_2018 YP_005514590.1 Beta-lactamase class D (Beta-lactamase OXA-109) AF509241.1.gene1.p01 Protein 5e-82 65
ABK1_2018 YP_005514590.1 Beta-lactamase class D (Beta-lactamase OXA-109) HQ122933.1.gene1.p01 Protein 1e-79 59
ABK1_2018 YP_005514590.1 Beta-lactamase class D (Beta-lactamase OXA-109) AY795964.gene.p01 Protein 1e-79 58
ABK1_2018 YP_005514590.1 Beta-lactamase class D (Beta-lactamase OXA-109) HM488987.1.gene1.p1 Protein 3e-79 58
ABK1_2018 YP_005514590.1 Beta-lactamase class D (Beta-lactamase OXA-109) HM488986.1.gene1.p1 Protein 1e-79 58
ABK1_2018 YP_005514590.1 Beta-lactamase class D (Beta-lactamase OXA-109) AY762325.1.gene1.p01 Protein 2e-79 58
ABK1_2018 YP_005514590.1 Beta-lactamase class D (Beta-lactamase OXA-109) AF201828.gene.p01 Protein 2e-79 58
ABK1_2018 YP_005514590.1 Beta-lactamase class D (Beta-lactamase OXA-109) FJ194494.1.gene1.p01 Protein 2e-78 58
ABK1_2018 YP_005514590.1 Beta-lactamase class D (Beta-lactamase OXA-109) HM488991.1.gene1.p1 Protein 4e-79 58
ABK1_2018 YP_005514590.1 Beta-lactamase class D (Beta-lactamase OXA-109) NC_011586.7044972.p0 Protein 1e-79 58
ABK1_2018 YP_005514590.1 Beta-lactamase class D (Beta-lactamase OXA-109) HM488992.1.gene1.p1 Protein 3e-79 58
ABK1_2018 YP_005514590.1 Beta-lactamase class D (Beta-lactamase OXA-109) HM488988.1.gene1.p1 Protein 1e-79 58
ABK1_2018 YP_005514590.1 Beta-lactamase class D (Beta-lactamase OXA-109) HM488989.1.gene1.p1 Protein 2e-79 58
ABK1_2018 YP_005514590.1 Beta-lactamase class D (Beta-lactamase OXA-109) HM488990.1.gene1.p1 Protein 1e-79 58
ABK1_2018 YP_005514590.1 Beta-lactamase class D (Beta-lactamase OXA-109) JN638887.1.gene1.p01 Protein 4e-79 58
ABK1_2018 YP_005514590.1 Beta-lactamase class D (Beta-lactamase OXA-109) AY288523.1.gene1.p01 Protein 8e-78 57
ABK1_2018 YP_005514590.1 Beta-lactamase class D (Beta-lactamase OXA-109) EF102240.1.gene13.p0 Protein 8e-71 50
ABK1_2018 YP_005514590.1 Beta-lactamase class D (Beta-lactamase OXA-109) NC_010481.6155789.p0 Protein 5e-71 50
ABK1_2018 YP_005514590.1 Beta-lactamase class D (Beta-lactamase OXA-109) AY665723.gene.p01 Protein 5e-71 50
ABK1_2018 YP_005514590.1 Beta-lactamase class D (Beta-lactamase OXA-109) GU831575.1.gene1.p01 Protein 3e-70 49
ABK1_2018 YP_005514590.1 Beta-lactamase class D (Beta-lactamase OXA-109) DQ519090.1.gene1.p01 Protein 9e-71 49
ABK1_2018 YP_005514590.1 Beta-lactamase class D (Beta-lactamase OXA-109) AY306130.1.gene1.p01 Protein 5e-44 44