Name : Hydth_0427 (Hydth_0427) Accession : YP_005511121.1 Strain : Hydrogenobacter thermophilus TK-6 Genome accession: NC_017161 Putative virulence/resistance : Virulence Product : type II secretion system protein E Function : - COG functional category : - COG ID : - EC number : - Position : 428901 - 430340 bp Length : 1440 bp Strand : - Note : COGs: COG2804 Type II secretory pathway ATPase PulE/Tfp pilus assembly pathway ATPase PilB; InterPro IPR001482:IPR003593; KEGG: pmx:PERMA_0824 general secretion pathway protein E (type II traffic warden ATPase)(cholera toxin secretion protein EpsE); PFAM: DNA sequence : ATGGATGCAGAGGTAGGTAGGCACATAAATCACGAGTTTCTCAGCGCCAATGGTATAGCACCTCTGGAGGAAGGAGAGAA CTTTGTAAAGTTTGCATGCCTTAAAGAGGATGCATACCTTAAAGAGCTTTTAGAGAGAGCTCTGGGCAAGAAGGTGATCT TTGAGTTGGTGGACCAAGAAAAACTCAAAAATCTCCTTGAGGACCCTATTAGCATAGGTTTAGAGCTGGAAGCTCTGTCT GAGGATGCTCTGGATGAGAAGAAACTTGAGAACATAGCAGAAGAAGCGCCAATAGTGAAGTTTGTCAACGACACCATAAA GGATGCCATAATGAGGTCTGCAACGGACATACACATAGAACAGTTTGAGAACCATGTAGTGGTCAGGTACAGAATAGATG GTATTCTCTACACGGTTAGGGAGTATCCCAAGTACATAGCACCCCCTGTTATATCAAGGATAAAGATACTCTCAAGACTC AACATAGCGGAAAAGAGACTGCCTCAGGACGGGAAGCTCTCTTACTCCCTAAACGGTCAGGATTATGACATAAGGGTGTC CACAGTTCCTTCTGTTCACGGTGAGGGTGTGGTACTTAGAATACTAAAGAGGGGAGAGATTAACCTGAGTCTTCACACTC TGGGATTTAGAGAGCAGGATGTGGATGCTCTTCTATCTTTCATAAGGAAGCCCTACGGTATGATACTGGTTACGGGACCT ACCGGCTCTGGTAAAACTACCACCTTATATGCCTGCATGAAGGAGATAAACACGGGCCAGAAAAAGATAATAACTGTTGA AGACCCTGTAGAGTACAATTTAAGGGGTGTTGTGCAGATTCAGGTGATGCCCAAGATAGGACTTACCTTTGCCAATGCTC TAAGAAACATACTCAGACAGGACCCGGATGTGATCATGATAGGAGAGATAAGGGACCTGGAGACTGCCAGCATAGCGGTT CAGGCATCACTCACAGGACACTTGGTGCTTGCAACCCTTCATACCAACGATGCTGCAAGTGCTTTTACAAGACTCATAGA TATGGGCGTTGAGGAATTCCTCTTAGCCTCCGCAGTGGTAGGCGTAATATCCCAAAGGCTTGTAAGGAAAGTATGTCCTA ACTGCATTTACGAATACAAACCCACAACTTTTGAGGAAGAGGTGCTAAAGATGAATGGTATAGAAAGACCACAAAAGCTA TACAGGGGGAAAGGGTGCGAGCGATGCAACAACACAGGCTACTCTGGAAGGACGGTGATAGGTGAGGTGTTAAAAGTCAC GGAAGATATAAGGAGTCTTGTGGTGAAAAAGTCCGATGCTGGAAAGATAAAAGAACAGGCTATAAAGGATGGTATGGTGC CTCTTCTCAAAGACGGACTTTTGAAGGCTGTGGAAGGCATAACAACCGTAGAGGAGATACTCAGAGTTTACAGAGACTGA Protein sequence : MDAEVGRHINHEFLSANGIAPLEEGENFVKFACLKEDAYLKELLERALGKKVIFELVDQEKLKNLLEDPISIGLELEALS EDALDEKKLENIAEEAPIVKFVNDTIKDAIMRSATDIHIEQFENHVVVRYRIDGILYTVREYPKYIAPPVISRIKILSRL NIAEKRLPQDGKLSYSLNGQDYDIRVSTVPSVHGEGVVLRILKRGEINLSLHTLGFREQDVDALLSFIRKPYGMILVTGP TGSGKTTTLYACMKEINTGQKKIITVEDPVEYNLRGVVQIQVMPKIGLTFANALRNILRQDPDVIMIGEIRDLETASIAV QASLTGHLVLATLHTNDAASAFTRLIDMGVEEFLLASAVVGVISQRLVRKVCPNCIYEYKPTTFEEEVLKMNGIERPQKL YRGKGCERCNNTGYSGRTVIGEVLKVTEDIRSLVVKKSDAGKIKEQAIKDGMVPLLKDGLLKAVEGITTVEEILRVYRD |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 6e-88 | 48 |
gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 4e-88 | 48 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
Hydth_0427 | YP_005511121.1 | type II secretion system protein E | VFG0182 | Protein | 1e-92 | 51 |
Hydth_0427 | YP_005511121.1 | type II secretion system protein E | VFG1876 | Protein | 4e-90 | 51 |
Hydth_0427 | YP_005511121.1 | type II secretion system protein E | VFG2048 | Protein | 2e-89 | 48 |
Hydth_0427 | YP_005511121.1 | type II secretion system protein E | VFG2426 | Protein | 7e-77 | 44 |