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Name : Hydth_1810 (Hydth_1810) Accession : YP_005512484.1 Strain : Hydrogenobacter thermophilus TK-6 Genome accession: NC_017161 Putative virulence/resistance : Virulence Product : type II secretion system protein E Function : - COG functional category : - COG ID : - EC number : - Position : 1661611 - 1663023 bp Length : 1413 bp Strand : - Note : COGs: COG2804 Type II secretory pathway ATPase PulE/Tfp pilus assembly pathway ATPase PilB; InterPro IPR001482:IPR003593:IPR007831; KEGG: aae:aq_1474 general secretion pathway protein E; PFAM: type II secretion system protein E; General secretory system I DNA sequence : ATGGACATACTAAAAACCTACAGGCTTGTGCCTGTGGAGGAAGGTGAAGATTACATAAAGCTCTTAGTTCCCAGAGGATA CGACCCTTTAGTAATAGAGGAGATAAGGTTCTTAACAGGAAAAAGTGTAGAAGCTCTTGAAGTGGATGGGGAGGAGTTTT CAAAGGAGCTTCAAAACAGGCTGGCTCAGGAAGAAGTTTATGTGGAGGAGCTAAAAGAAGAGGAGGACTCCAAAAGGGAC ATACTCCTGGAGGAAGAAAAAAGTCCGGCGGTGAGCTTTGTAAACTCCACGCTTATAAAGGCAACCACTTTATCCGCTTC CGACATACACATAGAGCCTTACGAGGATGGCTCTCTGGTGAGACTTCGCCTTGATGGTGTGCTTCACGACTATGTAAGCC TGCCTCTTTCCCTTCACGAGTCTGTTGTCTCGCGCATAAAGGTTCTGGCAAACCTCAATGTGGCGGAGAGAAGGGTGCCT CAAGATGGAAAGATAAGAGTGAGGATAGGTAAAAGGGACTTGGACATAAGAGTTTCCATAGTGCCTACAACTTTTGGAGA AAGGGTGGTGCTGAGACTCCTTGACAAGTCTGGCACTATGCTTACTCTGCAGGAACTTGGGCTTTCGGAGGAAGACCTAG AAAAAGTCAAGAGACTCGCTCAAAAGCCATACGGTATAGTGCTGGCAACTGGACCCACCGGAGCAGGCAAAAGTACTACA CTTTATGCCATGATTTTACACATAAAGAGTCCGCACAAAAACATAATAACCATAGAAGACCCGCCCGAGTATCAAGTAAA AGGTGTGAGTCAAATACAGGTAAATCCAAAGGTAGGACTCACCTTTGCCAGCGGACTGAGAGCCATCCTCAGACAGGACC CAGATGTGATAATGGTGGGGGAGATAAGAGATGGCGAAACAGCTCAAATAGCAGTCCACGCAGCTCTGACAGGTCACTTG GTTCTTTCAACTCTTCACACCAACGACGCTCCTTCCGCCATCACAAGACTTTCAGACCTCGGCATTGAGCCATTTTTAAT AGCTTCCTCTCTGGAGGGCGTGCTGGCTCAAAGACTTGTAAGAAAGGTGTGCGAGTACTGTAAAGAACCCTACAAACCTA CGAAGGAGGAACTCCATCAGCTGGGACTTGATGGAGATTACACCTTTTACAGAGGAAGGGGCTGTGAGATGTGTATGGGT ACAGGCTACAGGGGAAGGATGGGCATATACGAGGTGTTGGAGCTTGACGAAGAGTTAAAACAGCTAATCCTAAAAACTCA GGATGCCAACGATATAAGGAAGAAAGCCAAAGAAAAGGGTTTTAGAAGTATGTACGAGGATGGGCTTGAGAAAGTTATAA TGGGAATAACAACACCTGAGGAACTCATAAGAGCGGTTAAGGTAGAAGAATGA Protein sequence : MDILKTYRLVPVEEGEDYIKLLVPRGYDPLVIEEIRFLTGKSVEALEVDGEEFSKELQNRLAQEEVYVEELKEEEDSKRD ILLEEEKSPAVSFVNSTLIKATTLSASDIHIEPYEDGSLVRLRLDGVLHDYVSLPLSLHESVVSRIKVLANLNVAERRVP QDGKIRVRIGKRDLDIRVSIVPTTFGERVVLRLLDKSGTMLTLQELGLSEEDLEKVKRLAQKPYGIVLATGPTGAGKSTT LYAMILHIKSPHKNIITIEDPPEYQVKGVSQIQVNPKVGLTFASGLRAILRQDPDVIMVGEIRDGETAQIAVHAALTGHL VLSTLHTNDAPSAITRLSDLGIEPFLIASSLEGVLAQRLVRKVCEYCKEPYKPTKEELHQLGLDGDYTFYRGRGCEMCMG TGYRGRMGIYEVLELDEELKQLILKTQDANDIRKKAKEKGFRSMYEDGLEKVIMGITTPEELIRAVKVEE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 1e-91 | 51 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 1e-91 | 51 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Hydth_1810 | YP_005512484.1 | type II secretion system protein E | VFG0182 | Protein | 3e-94 | 53 |
| Hydth_1810 | YP_005512484.1 | type II secretion system protein E | VFG2048 | Protein | 1e-91 | 50 |
| Hydth_1810 | YP_005512484.1 | type II secretion system protein E | VFG1876 | Protein | 3e-90 | 49 |
| Hydth_1810 | YP_005512484.1 | type II secretion system protein E | VFG2426 | Protein | 1e-81 | 45 |
