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Name : Hydth_1763 (Hydth_1763) Accession : YP_005512437.1 Strain : Hydrogenobacter thermophilus TK-6 Genome accession: NC_017161 Putative virulence/resistance : Resistance Product : Arsenical pump membrane protein Function : - COG functional category : - COG ID : - EC number : - Position : 1617835 - 1619142 bp Length : 1308 bp Strand : + Note : COGs: COG1055 Na+/H+ antiporter NhaD and related arsenite permease; InterPro IPR000802; KEGG: saf:SULAZ_0803 arsenic efflux pump; PFAM: Arsenical pump membrane protein; SPTR: C1DUJ6 Arsenic efflux pump; PFAM: Arsenical pump membrane protein DNA sequence : ATGGAAAAGTTCTTGGCAGTAACCATATTCATCCTTTCGCTGGCTTTTGTTATAACTAAACCTAAAGGGATAGGTATAGG CTGGTCCGCGTGGGCTGGTGCCATTGCTTGCCTTCTTCTGGGTATTGTGTCTATTGGAGATGTCCTGTATATTGCAAGCC TGGTGTGGGATGCTACCCTAGCTTTTGTGTTTCTTGTGCTTATCTCCATAATCTTAGATAAAGCCGGATTTTTTGAATGG ACAGCTCTAAAGGCAATAGGCTACGCTAAGGGGAACGGGCTTTTGCTTTTTGTATTCTTGATGCTCTTAGGAGCTTTTAT CTCCGCCGTTTTTGCCAACGACGGAGCTGCTTTAATGCTTACCCCCATCATCTACTCAAAGATAAGGCATCTAAAACTTC CTCAAAGGATGGTGCTTCCCTACATTATGGGAAGCGGTTTTATATCGGATAGCGCAAGCCTGCCCCTCGTTATCTCCAAT TTAACTAATATAATAACCGCCCACTTTTTTAATATGGACTTTTGGCATTACGCCCTTTTGATGTTTTTACCTAACTTGGT CTCCATCTTGACAAGTATATTAGTCCTTTATGTCTACTATAGAAAAGATATGATAAAGAGGTACGACACAGATGTGCTTG AAGACCTCCCCCCAAAGTATGCGCTAAAGGACCCCTTTATCTTTAAGGTAGGTTGGTTTGTTATAATCGCTCTTGGTATT GCCTTTTTGGCGTTGGAGTTATACCATATGGCTAAACTTCCTTACTCTGCTATTCTTGGAGCTGGTGCGCTAATTCTGTC TTTGGCATCAATCAGACATCGTGTAGTGAAGATAGAGGAAGTCATAAGGTTTACACCCTGGAGCATAGTCTTTTTCTCTG TAGGTATGTATGCTGTAGTTTACAGCCTGAAGAAGGTAAACATAACTAACTTTATAACGCATGTGGTATCTTACCTGTAT CGTGTTGGAGAGTTCTATGCTCTTTTGGGTACCGGTCTTTTGTCCGCCTTTATGTCCGCAGTTATGAACAATCTGCCCAC CGTTATGTTAGTGAACATATCTATACAAGATGCGCATCTTCCAGAGAGATTTACACAATTTCTTGCCCTTGCCAACTTAG TAGGTACCAACATAGGACCAAAACTCACACCCATAGGCTCTTTGGCTACCCTCCTTTGGCTACATGTTTTGGAACACAAA GGCATAAAGATCACTTGGGGTTATTACATAAAAGCGGGTTTTGTTTTGACACTTCCCGTACTACTTGCGGTGCTTTTAAC TCTGTGCTTTATTTATTACCTAGTATGA Protein sequence : MEKFLAVTIFILSLAFVITKPKGIGIGWSAWAGAIACLLLGIVSIGDVLYIASLVWDATLAFVFLVLISIILDKAGFFEW TALKAIGYAKGNGLLLFVFLMLLGAFISAVFANDGAALMLTPIIYSKIRHLKLPQRMVLPYIMGSGFISDSASLPLVISN LTNIITAHFFNMDFWHYALLMFLPNLVSILTSILVLYVYYRKDMIKRYDTDVLEDLPPKYALKDPFIFKVGWFVIIALGI AFLALELYHMAKLPYSAILGAGALILSLASIRHRVVKIEEVIRFTPWSIVFFSVGMYAVVYSLKKVNITNFITHVVSYLY RVGEFYALLGTGLLSAFMSAVMNNLPTVMLVNISIQDAHLPERFTQFLALANLVGTNIGPKLTPIGSLATLLWLHVLEHK GIKITWGYYIKAGFVLTLPVLLAVLLTLCFIYYLV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| arsB | YP_005754065.1 | arsenical pump membrane protein | Not tested | Type-XI SCCmec | Protein | 8e-75 | 47 |
| SH0109 | YP_252024.1 | arsenical pump membrane protein | Not tested | SCCmec | Protein | 7e-73 | 46 |
| arsB | YP_252017.1 | arsenical pump membrane protein | Not tested | SCCmec | Protein | 1e-74 | 46 |
| arsB2 | YP_001007633.1 | arsenical pump membrane protein | Not tested | YAPI | Protein | 8e-65 | 44 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Hydth_1763 | YP_005512437.1 | Arsenical pump membrane protein | BAC0574 | Protein | 2e-75 | 47 |
| Hydth_1763 | YP_005512437.1 | Arsenical pump membrane protein | BAC0575 | Protein | 2e-74 | 46 |
| Hydth_1763 | YP_005512437.1 | Arsenical pump membrane protein | BAC0578 | Protein | 4e-66 | 45 |
| Hydth_1763 | YP_005512437.1 | Arsenical pump membrane protein | BAC0576 | Protein | 1e-65 | 45 |
| Hydth_1763 | YP_005512437.1 | Arsenical pump membrane protein | BAC0031 | Protein | 4e-63 | 44 |
| Hydth_1763 | YP_005512437.1 | Arsenical pump membrane protein | BAC0577 | Protein | 7e-66 | 42 |
