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Name : Hydth_1590 (Hydth_1590) Accession : YP_005512266.1 Strain : Hydrogenobacter thermophilus TK-6 Genome accession: NC_017161 Putative virulence/resistance : Unknown Product : SsrA-binding protein Function : - COG functional category : - COG ID : - EC number : - Position : 1462893 - 1463369 bp Length : 477 bp Strand : + Note : COGs: COG0691 tmRNA-binding protein; InterPro IPR020081:IPR000037; KEGG: aae:aq_287 SsrA-binding protein; PFAM: SmpB protein; SPTR: A8UXX1 SsrA-binding protein; TIGRFAM: SsrA-binding protein; PFAM: SmpB protein; TIGRFAM: SsrA-binding protein DNA sequence : ATGGCTAAGCAAGATGGAAAGCACATTATAGCTATAAACAAAGAGGCAAGGGCAGAGTATGAACTGCTAGAAACTTACGA GGCGGGAATAGTGTTGGAGGGTTCTGAGGTAAAAGCCTTAAGGAGTAAGCAGACGGTCTCCTTTAAAGACAGCTTTGTGA GGATAGAAAACGGAGAAGCTTGGCTATACAACCTTTATATATCACCGTATAGATATGCCACCATAAAACCCCCCGACCCC ACGAGGAAGAGAAAACTCTTACTTCACAAGAGGGAGATCCTAAGGCTCATGGGAAAGGTTCAAGAGAGAGGATACACCAT TATACCACTCTCCCTTTACTTTAAAAACAACAGGGTAAAGGTGGAGATAGCCCTTGCCAGAGGCAAAAAGCTGCACGACA GAAGAGAGGAACTGAGGGAGAGGGATATGAGAAGGCAGTTGGAGAGGGAGATAAAAGAAGGCAAGCTAAAACTCTGA Protein sequence : MAKQDGKHIIAINKEARAEYELLETYEAGIVLEGSEVKALRSKQTVSFKDSFVRIENGEAWLYNLYISPYRYATIKPPDP TRKRKLLLHKREILRLMGKVQERGYTIIPLSLYFKNNRVKVEIALARGKKLHDRREELRERDMRRQLEREIKEGKLKL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AET14351.1 | SsrA-binding protein | Not tested | SaPI68111 | Protein | 5e-23 | 48 |
| smpB | YP_001800894.1 | SsrA-binding protein | Not tested | Not named | Protein | 1e-25 | 48 |
| smpB | NP_230495.1 | SsrA-binding protein | Not tested | VPI-1 | Protein | 7e-18 | 43 |
