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Name : Hydth_1287 (Hydth_1287) Accession : YP_005511968.1 Strain : Hydrogenobacter thermophilus TK-6 Genome accession: NC_017161 Putative virulence/resistance : Virulence Product : nucleotide sugar dehydrogenase Function : - COG functional category : - COG ID : - EC number : - Position : 1180529 - 1181842 bp Length : 1314 bp Strand : - Note : COGs: COG0677 UDP-N-acetyl-D-mannosaminuronate dehydrogenase; InterPro IPR016040:IPR014027:IPR008927:IPR001732:IPR 014026:IPR017476; KEGG: tye:THEYE_A0424 VI polysaccharide biosynthesis protein VipA/TviB; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-g DNA sequence : GTGATTGACTTTAAAAGTCTGTTGGAAGGCAAGGAGAAAATCTGCGTAGTTGGACTTGGTTATGTGGGCCTTCCTTTGGC TTTAGCTTTTTCCAAGCACTTCAAAGTGGTTGGTTACGATAAAAAGGTATCAAGAATAGACGAGCTTCTCTCCGGAGTGG ATACCACAGGTGAGATAAAAAAAGAAGACCTTCTTAAGCACAGTGTAGAGTTTACCAGCGACGAAAGACGCATATCGGAA GCGAGGTTTATAGTGGTGGCAGTTCCCACACCTGTTGACAAGCTAAAAAATCCAGACCTTTCTTTCCTGAAAGAAGCCTC TAAAACTGTAGGAAGGCATTTAAGTAAAGGTAGCGTCGTAGTGTATGAGTCCACCGTTTATCCGGGAGCTACCGAGGAAG TCTGCGTGCCTATACTTGAGAAGGAGAGCGGATTAAAGTGGAAGAGGGACTTCTTTGTAGGGTACTCACCAGAGAGAGTA AATCCTGGTGATAAGGAGCATACCATAGAAAAAATTGTCAAGGTGGTGGCTGGAGATACAGAGAGCACCCTTGAGCTGAT AGCATCGGTTTATGGCAAAGTCATAGAGGTGGGTGTTTACAGAGCACCTGATATAAGGACTGCAGAGGCTGCAAAGGTCA TAGAGAACATACAGAGAGACATAAACATAGCTCTCATGAACGAGCTTTCTGTAATATTTCACAAGTTGGGGATTGATACA AAGGAAGTTTTAAAAGCTGCAAGCACCAAATGGAACTTTTTGAGGTTTGAGCCAGGACTTGTAGGTGGACACTGTATACC TGTAGACCCCTACTATCTTGCCCATAAATCCTTAGAGGCTGGACATGTGCCAGAGCTAATTCTGGCGGGAAGAAGGATAA ATGAGAACATGCCTTACTATGTAGCTTATCAGACAGTAAAACTGCTCATAAAGAGCGGTAAAAGGGTAAATTCTGCAAAA GTTTTGCTGATGGGCATAACCTTTAAAGAGAATGTACCTGATATCAGAAACAGCAAGGTTTATGAACTTTATAAGGAGCT AAAAGAGTTCGGCATGGAGGTTTATGTATACGACCCTGTGGCTAACCAGAAGGAGGTAAAGGAAGAGTACGGTATAGACC TTCTTAAGGACTTAAAAGCGCACGCACCTTATGACTGTATCCTTTTAGCTGTCAAACACAGCATATTTTTAGAGAGTTTT GACCTTTCCTTTTACAAGGCAATAATGACTGAGCCATACATCCTTGTGGACATAAAAGGCATTTACGAAAAAGATGCAGC CATTAAAGAGGGTTTTGTTTACTGGAGGCTATAA Protein sequence : MIDFKSLLEGKEKICVVGLGYVGLPLALAFSKHFKVVGYDKKVSRIDELLSGVDTTGEIKKEDLLKHSVEFTSDERRISE ARFIVVAVPTPVDKLKNPDLSFLKEASKTVGRHLSKGSVVVYESTVYPGATEEVCVPILEKESGLKWKRDFFVGYSPERV NPGDKEHTIEKIVKVVAGDTESTLELIASVYGKVIEVGVYRAPDIRTAEAAKVIENIQRDINIALMNELSVIFHKLGIDT KEVLKAASTKWNFLRFEPGLVGGHCIPVDPYYLAHKSLEAGHVPELILAGRRINENMPYYVAYQTVKLLIKSGKRVNSAK VLLMGITFKENVPDIRNSKVYELYKELKEFGMEVYVYDPVANQKEVKEEYGIDLLKDLKAHAPYDCILLAVKHSIFLESF DLSFYKAIMTEPYILVDIKGIYEKDAAIKEGFVYWRL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cap1L | AAA64651.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 4e-101 | 55 |
| tviB | NP_807945.1 | VI polysaccharide biosynthesis UDP-glucose/GDP-mannose dehydrogenase | Virulence | SPI-7 | Protein | 4e-93 | 54 |
| tviB | NP_458740.1 | Vi polysaccharide biosynthesis protein, UDP-glucose/GDP-mannose dehydrogenase | Virulence | SPI-7 | Protein | 4e-93 | 54 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Hydth_1287 | YP_005511968.1 | nucleotide sugar dehydrogenase | VFG0431 | Protein | 2e-93 | 54 |
