Gene Information

Name : Hydth_1258 (Hydth_1258)
Accession : YP_005511939.1
Strain : Hydrogenobacter thermophilus TK-6
Genome accession: NC_017161
Putative virulence/resistance : Unknown
Product : porphobilinogen deaminase
Function : -
COG functional category : -
COG ID : -
EC number : 2.5.1.61
Position : 1149693 - 1150607 bp
Length : 915 bp
Strand : +
Note : COGs: COG0181 Porphobilinogen deaminase; InterPro IPR000860; KEGG: aae:aq_263 porphobilinogen deaminase; PFAM: Porphobilinogen deaminase; PRIAM: Hydroxymethylbilane synthase; SPTR: A8UUB7 Porphobilinogen deaminase; TIGRFAM: porphobilinogen deaminase; PFAM

DNA sequence : 
ATGAGGCTAAGAATTGGCACAAGAAAAAGTAAGCTTGCTCTCTGGCAGGCAAACTTTGTTAAAGAAAAGTTAGAAAAGAT
GGGGCATCAGGTGGATTTGGTGCATATAACCACATCGGGAGACAAAATCTTGGATGTTCCTCTTGCCAAGATAGGTGGAA
AGGGTCTTTTTGTGAAGGAGATTGAAGAGGCACTTATGAAGAAGGAGATAGATTTAGCTGTTCACTCACTTAAAGACGTG
CCTATGAACCTTCCTGAGGGTTTAAAGATTGGAGCTGTGACCGAAAGAGAAAATCCCTTTGATGTACTCATATCCAAAGA
CCATCTGCCTTTAGAAGAGCTCCCATCAAATGCTAAGGTAGGTACATCCTCTTTAAGAAGGCAGGTACAGATAAAAAGAA
GGCGGGGGGACCTTAGAGTAGAAATGCTGAGGGGTAATGTGGATACACGCATCAGAAAACTTGATGAAGGGCTTTACCAT
GCGGTGATCCTGGCTTATGCGGGCGTAAAAAGGATGGGGCTTGAGGATAGGATAACTCAGGTGCTTGAAGACTTTATTCC
AGCGGTGGGGCAAGGCTCTTTGGCTATTGAGATAAGGCAGGATGACAGTGCGGTGGAAGAGATAGTGAGCTGTTTTGACC
ACTATGAGAGCAGACTGAGGGCGGAGTGTGAGAGGGCTTTTTTGAGAGAGCTTCAGGGCGGCTGTCAGGTACCTATAGGT
GCTTACTCTTGGATAGAGGGAGACACCATCTTTATAAAAGGTTTCGTATCTGACTTGGAAGGGATTAAATTTATAGAAGG
GATGAGGAGCGGAGAGGCTAAAGAAGCTCAGCAGATAGGTAAAAGTTTGGCGCATGACCTTCTCAGAGAGGGTGCTGACC
AAATACTGAAGGAGGTTTATGGATGGACCCCGTAG

Protein sequence : 
MRLRIGTRKSKLALWQANFVKEKLEKMGHQVDLVHITTSGDKILDVPLAKIGGKGLFVKEIEEALMKKEIDLAVHSLKDV
PMNLPEGLKIGAVTERENPFDVLISKDHLPLEELPSNAKVGTSSLRRQVQIKRRRGDLRVEMLRGNVDTRIRKLDEGLYH
AVILAYAGVKRMGLEDRITQVLEDFIPAVGQGSLAIEIRQDDSAVEEIVSCFDHYESRLRAECERAFLRELQGGCQVPIG
AYSWIEGDTIFIKGFVSDLEGIKFIEGMRSGEAKEAQQIGKSLAHDLLREGADQILKEVYGWTP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00327 YP_008207792.1 Porphobilinogen deaminase Not tested AbaR25 Protein 2e-65 50
BJAB0868_00331 YP_008211657.1 Porphobilinogen deaminase Not tested AbaR26 Protein 2e-65 50