Gene Information

Name : Hydth_0118 (Hydth_0118)
Accession : YP_005510821.1
Strain : Hydrogenobacter thermophilus TK-6
Genome accession: NC_017161
Putative virulence/resistance : Unknown
Product : transketolase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 121415 - 123400 bp
Length : 1986 bp
Strand : -
Note : COGs: COG0021 Transketolase; InterPro IPR005478:IPR005474:IPR018970:IPR005475:IPR 005476:IPR009014:IPR015941; KEGG: aae:aq_1765 transketolase; PFAM: Transketolase domain protein; Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase-like; Transketolas

DNA sequence :
ATGAACAGGGATGATACTGTCATAAACACTATACGGTTTCTCAGCGTTGACCAGGTAGAAAGAGCCAAGTCAGGACACCC
AGGAATGCCACTGGGTGCCTCCCACATAGCTTACCTCATCTTTGACAGATTTTTAAAGTTTAATCCCAAGGACCCTAATT
GGATAAACAGAGACAGGTTTGTCCTTTCTGCAGGGCACGCAAGTGCCATGCTTTACTCTTTACTTTTTGTTATGGGCTAT
GATATTAACCTTGAAGACTTAAAGTCCTTTAGACAGTTAAATAGCAGAACGCCGGGGCATCCAGAGAGACACCTAACCCC
GGGTGTAGAGGCAACCACTGGACCTCTCGGTCAAGGCATTGGCAACGCAGTAGGTATGGCTATTGCGGAGAAGTATCTGT
CTAACTTCTTCAACAGAGAAGGTTTCCCCATAATAGACCACTACACCTTTGCCTTAGTAAGCGATGGAGACCTTATGGAG
GGAGTCTCCTGTGAGGTGGGACAGCTGGCAGGACACCTCAAACTCGGCAAACTTATAGTCATCTGGGATAACAATGGAGT
GTCCATAGATGGACCCACATCTCTTGCTTGGTCGGAGGATGTGTTAAAGAGATTTTCAGCTTTTGGCTGGCATGTGGCTC
ACATAGAGGACGGCTACAACCTGGATGAGTTAGAAAGAGCCATAAAGTCTGCCATGGAGGAAAAAGAAAGACCATCTTTT
ATCTCCGTCAGAACCCACTTAGGTTATGGCAGTCCAAAGCAGGACGATGCCAGTGTGCATGGTGCTCCATTGGGCAAAGA
ATTAGCTCTTGAAACCAAGCGAAGGTTTGGCTGGAGCGAAGAGGAGTTTTATGTGCCTGAGGAAGTATACAACTACAGAA
AAGAGAAGATAGAAAAAGGATTGAAAGCACAAGAGGAGTGGAACAGACTCTTTGAGGAGTACAGAAGGGCTTACCCGGAC
TTGGCTCAGAAGCTTTTAAAAGCTTTCAAAGGGGATTGGGGGGAGGATTACAAAATTCACATACCAGTATTTACAGAGCC
AATGGCTACCAGACAAGCAAGCGGTAAGCTTCTAAATGCTATAGCCAAGCACATTCCCACTATGATAGGTGGCTCTGCTG
ACCTTTCCGAGTCCAACAACACCTACCTTCATGGTATGGGAGACTTTCTTGCTGAGAATCCTTTGGGGAGAAACATACAC
TACGGAGTGAGAGAACACGCCATGGGCACCATACTAAATGGCATGGCTTATCACGGAGGAGTACTGCCTTACGGAGGTAC
TTTTCTGATATTCTCCGATTACATGAGACCCAGCATCAGGCTTGCTGCCATGTCAGGACTGCAGGTTATATATGTCTTTA
CGCACGACTCTGTAGGTTTGGGAGAGGATGGTCCAACGCACCAACCCATAGAACAGCTTTGCTCCCTGAGACTCATACCA
AACCTGTGGGTTTTAAGACCAGCTGATGCCAACGAAGTAGGTATAGCTTGGGACATGGCTATTCAAAGAAAGGATGGACC
AGTAGCTATAGTGCTCTCAAGACAAAAACTTCCCATAATAGATAGAAACAGATACGCATTCTACGAGAATGCAAGGAGGG
GAGCTTACATAATTGCAGACACGCAGGGCACGCCTGACCTTATCATATTTGCCAGCGGTTCGGAGGTTCACCCTTCTCTG
TCTGCCAAGCACATATTGGAAGAGGAGGGTATAAAAGTGAGAGTTGTAAATGTCCTATCCTTTGAAGTTTTTGAACTGCA
AAAGGAAGATTACAAAGAGTATGTCCTATCACCACAGGTCAAAAGGAGGGTGGCTGTTGAAGCCGGAAGAGGACTTTGCT
GGTACAAGTATGTGGGGATGGATGGACTTGTTATCAGCATGGAGGAGTTTGGAAAATCCGCACCTGGAGATGTTCTTATG
GATCACTTTGGGTTTACAGGTAAGAAGATAGCTCAGAGAATAAAGGAGTTTTACTTTAAACAATAG

Protein sequence :
MNRDDTVINTIRFLSVDQVERAKSGHPGMPLGASHIAYLIFDRFLKFNPKDPNWINRDRFVLSAGHASAMLYSLLFVMGY
DINLEDLKSFRQLNSRTPGHPERHLTPGVEATTGPLGQGIGNAVGMAIAEKYLSNFFNREGFPIIDHYTFALVSDGDLME
GVSCEVGQLAGHLKLGKLIVIWDNNGVSIDGPTSLAWSEDVLKRFSAFGWHVAHIEDGYNLDELERAIKSAMEEKERPSF
ISVRTHLGYGSPKQDDASVHGAPLGKELALETKRRFGWSEEEFYVPEEVYNYRKEKIEKGLKAQEEWNRLFEEYRRAYPD
LAQKLLKAFKGDWGEDYKIHIPVFTEPMATRQASGKLLNAIAKHIPTMIGGSADLSESNNTYLHGMGDFLAENPLGRNIH
YGVREHAMGTILNGMAYHGGVLPYGGTFLIFSDYMRPSIRLAAMSGLQVIYVFTHDSVGLGEDGPTHQPIEQLCSLRLIP
NLWVLRPADANEVGIAWDMAIQRKDGPVAIVLSRQKLPIIDRNRYAFYENARRGAYIIADTQGTPDLIIFASGSEVHPSL
SAKHILEEEGIKVRVVNVLSFEVFELQKEDYKEYVLSPQVKRRVAVEAGRGLCWYKYVGMDGLVISMEEFGKSAPGDVLM
DHFGFTGKKIAQRIKEFYFKQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
APECO1_2641 YP_859417.1 transketolase Not tested Not named Protein 2e-147 48
tktA AAO17218.1 TktA Not tested tcd island Protein 3e-140 47