Gene Information

Name : fliP (YPD8_0617)
Accession : YP_005507700.1
Strain : Yersinia pestis D182038
Genome accession: NC_017160
Putative virulence/resistance : Virulence
Product : putative flagellar assembly protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 766949 - 767719 bp
Length : 771 bp
Strand : -
Note : -

DNA sequence :
ATGAGCCGCAGCCTTCGAGCGATAACACCGGTGACCATCATCAGCCGCGGCCTGCTGGTGGGCGGACTGCTGTATTCCCC
TCTTCTGCTGGCGCAGGAGGGGGGGATCACCCTGTTCAATACCGTACAAACCGCAACGGGGCAAGATTACAACGTTAAGA
TTGAAATCCTGATCCTGATGACCCTGCTCGGTTTGTTGCCGATTATGATGCTGATGATGACCTGCTTTACTCGCTTTATT
ATTGTGCTGGCGATATTGCGTCAGGCACTGGGGTTACAGCAAAGCCCGCCGAATAAAGTCCTGACCGGTATCGCCCTCGC
CCTGACCTTGCTGGTTATGCGCCCGGTGTGGACCAAAATTCATCAGGATGCGGTCATTCCTTTCCAACAGGATGAAATTA
CGCTTTCGCAGGCTCTGGGCCGGGCAGAAGCGCCGTTGAAGAACTATATGCTCGCGCAGACCAGTACTAAATCACTGGAT
CAAATGATGGCTATCGCCCAAGTCAGTGGCGAGCCACAACAGCAGGATTTGAGCGTGGTCACCCCCGCTTATGTGCTCAG
TGAGCTGAAAACCGCTTTCCAGATGGGCTTTATGATTTATATCCCTTTTCTGGTGATTGACCTGATTGTGGCCAGTATTT
TGATGGCGATGGGAATGATGATGCTATCGCCCTTAATTGTCTCATTGCCATTTAAATTAATGCTGTTTGTCTTGTGTGAT
GGCTGGACATTAATGGTTGGCACCCTCACTGCCAGCGTTCAGGGGCTATAG

Protein sequence :
MSRSLRAITPVTIISRGLLVGGLLYSPLLLAQEGGITLFNTVQTATGQDYNVKIEILILMTLLGLLPIMMLMMTCFTRFI
IVLAILRQALGLQQSPPNKVLTGIALALTLLVMRPVWTKIHQDAVIPFQQDEITLSQALGRAEAPLKNYMLAQTSTKSLD
QMMAIAQVSGEPQQQDLSVVTPAYVLSELKTAFQMGFMIYIPFLVIDLIVASILMAMGMMMLSPLIVSLPFKLMLFVLCD
GWTLMVGTLTASVQGL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hrcR AAT96262.1 HrcR Virulence S-PAI Protein 2e-29 42
hrcR AAT96303.1 HrcR Virulence S-PAI Protein 2e-29 42
hrcR AAT96343.1 HrcR Virulence S-PAI Protein 2e-29 42
hrcR ABA47279.1 HrcR Virulence S-PAI Protein 2e-29 42
hrcR AAB06005.2 HrcR Virulence Hrp PAI Protein 4e-31 42
hrcR NP_791222.3 type III secretion protein HrcR Virulence Hrp PAI Protein 4e-23 41
hrcR AAG33884.1 HrcR Virulence Hrp PAI Protein 3e-23 41
ysaR AAS66846.1 YsaR Not tested SSR-1 Protein 5e-27 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fliP YP_005507700.1 putative flagellar assembly protein VFG1259 Protein 4e-52 55
fliP YP_005507700.1 putative flagellar assembly protein VFG2494 Protein 8e-44 54
fliP YP_005507700.1 putative flagellar assembly protein VFG2016 Protein 9e-47 53
fliP YP_005507700.1 putative flagellar assembly protein VFG2338 Protein 6e-44 53
fliP YP_005507700.1 putative flagellar assembly protein VFG0044 Protein 2e-29 44
fliP YP_005507700.1 putative flagellar assembly protein VFG1773 Protein 6e-28 41