Gene Information

Name : YPD8_3307 (YPD8_3307)
Accession : YP_005510368.1
Strain : Yersinia pestis D182038
Genome accession: NC_017160
Putative virulence/resistance : Unknown
Product : transposase for insertion sequence IS100
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4185690 - 4186712 bp
Length : 1023 bp
Strand : -
Note : -

DNA sequence :
ATGGTCACTTTTGAGACAGTTATGGAAATTAAAATCCTGCACAAGCAGGGAATGAGTAGCCGGGCGATTGCCAGAGAACT
GGGGATCTCCCGCAATACCGTTAAACGTTATTTGCAGGCAAAATCTGAGCCGCCAAAATATACGCCGCGACCTGCTGTTG
CTTCACTCCTGGATGAATACCGGGATTATATTCGTCAACGCATCGCCGATGCTCATCCTTACAAAATCCCGGCAACGGTA
ATCGCTCGCGAGATCAGAGACCAGGGATATCGTGGCGGAATGACCATTCTCAGGGCATTCATTCGTTCTCTCTCGGTTCC
TCAGGAGCAGGAGCCTGCCGTTCGGTTCGAAACTGAACCCGGACGACAGATGCAGGTTGACTGGGGCACTATGCGTAATG
GTCGCTCACCGCTTCACGTGTTCGTTGCTGTTCTCGGATACAGCCGAATGCTGTACATCGAATTCACTGACAATATGCGT
TATGACACGCTGGAGACCTGCCATCGTAATGCGTTCCGCTTCTTTGGTGGTGTGCCGCGCGAAGTGTTGTATGACAATAT
GAAAACTGTGGTTCTGCAACGTGACGCATATCAGACCGGTCAGCACCGGTTCCATCCTTCGCTGTGGCAGTTCGGCAAGG
AGATGGGCTTCTCTCCCCGACTGTGTCGCCCCTTCAGGGCACAGACTAAAGGTAAGGTGGAACGGATGGTGCAGTACACC
CGTAACAGTTTTTACATCCCACTAATGACTCGCCTGCGCCCGATGGGGATCACTGTCGATGTTGAAACAGCCAACCGCCA
CGGTCTGCGCTGGCTGCACGATGTCGCTAACCAACGAAAGCATGAAACAATCCAGGCCCGTCCCTGCGATCGCTGGCTCG
AAGAGCAGCAGTCCATGCTGGCACTGCCTCCGGAGAAAAAAGAGTATGACGTGCATCTTGATGAAAATCTGGTGAACTTC
GACAAACACCCCCTGCATCATCCACTCTCCATCTACGACTCATTCTGCAGAGGAGTGGCGTGA

Protein sequence :
MVTFETVMEIKILHKQGMSSRAIARELGISRNTVKRYLQAKSEPPKYTPRPAVASLLDEYRDYIRQRIADAHPYKIPATV
IAREIRDQGYRGGMTILRAFIRSLSVPQEQEPAVRFETEPGRQMQVDWGTMRNGRSPLHVFVAVLGYSRMLYIEFTDNMR
YDTLETCHRNAFRFFGGVPREVLYDNMKTVVLQRDAYQTGQHRFHPSLWQFGKEMGFSPRLCRPFRAQTKGKVERMVQYT
RNSFYIPLMTRLRPMGITVDVETANRHGLRWLHDVANQRKHETIQARPCDRWLEEQQSMLALPPEKKEYDVHLDENLVNF
DKHPLHHPLSIYDSFCRGVA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
y2411 NP_669718.1 transposase Not tested HPI Protein 9e-165 100
unnamed CAB46599.1 IS100 transposase Not tested HPI Protein 7e-165 100
YPTB1585 YP_070113.1 transposase Not tested HPI Protein 9e-165 100
api83 CAF28557.1 transposase Not tested YAPI Protein 7e-165 100
unnamed CAA21403.1 - Not tested HPI Protein 9e-165 100
y1093 YP_002346890.1 transposase for insertion sequence IS100 Not tested HPI Protein 9e-165 100
y1094 CAC43410.1 IS100 transposase; transposase ORFA Not tested PAI III 536 Protein 9e-164 99
y1093 CAD33720.1 ORF A protein Not tested PAI I 536 Protein 4e-163 99
s0035 CAD33773.1 ORF A protein Not tested PAI I 536 Protein 9e-164 99
y1094 CAD42088.1 OrfA protein of IS100 transposase Not tested PAI II 536 Protein 9e-164 99
orfA CAE85182.1 OrfA protein, transposase, IS100 Not tested PAI V 536 Protein 9e-164 99
unnamed AAG37051.1 unknown Not tested espC PAI Protein 6e-154 96

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
YPD8_3307 YP_005510368.1 transposase for insertion sequence IS100 VFG1607 Protein 5e-164 99
YPD8_3307 YP_005510368.1 transposase for insertion sequence IS100 VFG1461 Protein 2e-163 99
YPD8_3307 YP_005510368.1 transposase for insertion sequence IS100 VFG1514 Protein 5e-164 99
YPD8_3307 YP_005510368.1 transposase for insertion sequence IS100 VFG1626 Protein 5e-164 99
YPD8_3307 YP_005510368.1 transposase for insertion sequence IS100 VFG0780 Protein 3e-154 96