Gene Information

Name : YPD8_2937 (YPD8_2937)
Accession : YP_005510002.1
Strain : Yersinia pestis D182038
Genome accession: NC_017160
Putative virulence/resistance : Virulence
Product : DNA mismatch repair protein MutS
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3718278 - 3720737 bp
Length : 2460 bp
Strand : +
Note : -

DNA sequence :
ATGGGGGATTTTTATGAACTGTTCTATAGTGATGCCAAGCGAGCCTCACAACTGTTGGATATCTCACTGACTAAACGTGG
TGCTTCAGCCGGTGAACCCATACCGATGGCAGGCGTCCCCTATCATTCGATAGAAAACTATCTGGCTAAGCTAGTGCAAT
TAGGTGAGTCAGCCGCCATCTGTGAGCAAATTGGTGATCCAGCCACCAGCAAAGGGCCAGTTGAACGGAAGGTTGTCCGT
ATCGTTACACCGGGCACAATCAGCGATGAAGCGCTGCTACAAGAGCGGCAAGATAACTTACTGGCGGCTATCTGGCAGGA
TGCCAAAGGGTTTGGGTATGCCACTCTGGATATCAGCTCTGGCCGCTTCCGGGTTGCAGAACCCGCCGATCTTGAAACGA
TGGCTGCCGAGTTACAACGCACCAATCCTGCCGAGTTACTGTATCCGGAAAACTTCGAGCCTATGTCGTTGATCGAGCAT
CGACATGGCTTACGCCGCCGGCCTTTATGGGAGTTTGAGCTGGATACCGCCAAACAACAGCTTAATCTGCAATTCGGGAC
CCGTGATTTAATTGGTTTCGGCGTTGAGCAAGCCCATCTGGCACTGCGGGCGGCGGGCTGCCTGCTGCAATATGTCAAAG
ATACCCAACGCACATCCCTGCCGCATATCCGTGGCCTGACCATGGAGCGCCAGCAAGATGGCATCATTATGGATGCTGCT
ACCCGTCGTAATCTCGAATTGACGCAGAACCTATCCGGTGGCAGTGAAAATACGCTGGCAGCCATCCTCGATTGCAGCGT
GACGCCAATGGGTAGCCGGATGCTAAAACGCTGGTTACATATGCCAATCCGCGATATTCGCGTGCTCACGGATCGGCAAC
AAGCCATTGGTGGCCTACAAGATATCGCCGCCGAGTTACAAACCCCCTTGAGACAAGTGGGCGATTTAGAACGTATTTTG
GCACGCTTAGCTCTGCGAACTGCCCGTCCACGCGATTTGGCCAGAATGCGTCATGCTTTCCAGCAACTGCCAGAAATCCA
CCGTTTATTGCAACCTATTGATGTTCCTCATGTACAGAACTTGTTATCACAGGTGGGCCAATTCGACGAATTGCAAGACT
TATTGGAGCGGGCCATTGTCGAGACGCCACCAGTATTAGTCCGCGATGGCGGCGTTATTGCATCAGGTTATAACGCTGAG
TTAGATGAATGGCGGGCGCTGGCCGATGGTGCAACCGATTATCTGGATCGGTTGGAAATCCGTGAGCGGGAGAAGTTAGG
GCTGGACACACTAAAAGTGGGCTTTAATGGTGTACATGGCTATTACATTCAGGTTAGCCGTGGTCAGAGCCATCTGGTGC
CTATTCATTATGTCCGTCGGCAAACACTGAAAAATGCCGAGCGCTACATTATTCCGGAGCTGAAAGAGTACGAAGATAAG
GTTCTGACCTCAAAAGGTAAGGCACTGGCAATTGAGAAAGGGTTGTACGAAGAAATTTTCGATTTGCTGCTGCCGCATCT
GCCAGAATTACAACTCAGTGCTAATGCACTGGCTGAATTAGATGTACTGGCTAATCTGGCGGAAAGAGCTGAAACACTCA
ACTACTCTTGCCCAACCCTGAGCGATAAGCCGGGGATTAAGATTATGGGTGGCCGTCACCCGGTTGTGGAACAGGTCCTC
AAAGAACCCTTTATTTCTAACCCGTTGACGTTATCTCCTCAGCGACGGATGTTGATCATTACTGGGCCGAACATGGGCGG
CAAAAGTACCTATATGCGCCAAACGGCGCTGATTGTGCTCTTGGCACACCTGGGAAGCTATGTCCCTGCGGATCAGGCAA
CCATCGGGCCTATTGACCGCATATTTACCCGCGTCGGTGCCGCTGACGATCTGGCCTCTGGTCGTTCGACCTTTATGGTG
GAAATGACCGAGACCGCGAATATTCTGCATAACGCCACCGAACAAAGCCTGGTATTGATGGATGAGATTGGCCGTGGCAC
ATCCACCTATGATGGTTTGTCATTGGCCTGGGCTTGTGCAGAAAATCTGGCCAGCCGTATCAAAGCAATGACGCTATTTG
CGACGCATTACTTTGAATTAACGACATTGCCAGAAAAAATGGAAGGTGTGGTAAATGTTCATCTTGATGCATTGGAGCAC
GGCGAAACCATCGCGTTTATGCACAGTGTACAAGAGGGTGCAGCCAGTAAAAGTTATGGCCTGGCAGTAGCCGCACTGGC
TGGTGTGCCACGCGATGTCATTAAGCGAGCACGACAAAAACTGAAAGAGCTGGAATCACTCTCTAATAACGCCGCCGCCA
GTACGATTGATGGCTCACAAATGACGTTGTTAAATGAAGAAATCCCTCCCGCAGTGGAAGCGCTGGAAGCGCTGGATCCG
GATTCATTGTCACCGCGTCAGGCACTGGAGTGGATCTATCGCTTGAAGAACATGGTGTAA

Protein sequence :
MGDFYELFYSDAKRASQLLDISLTKRGASAGEPIPMAGVPYHSIENYLAKLVQLGESAAICEQIGDPATSKGPVERKVVR
IVTPGTISDEALLQERQDNLLAAIWQDAKGFGYATLDISSGRFRVAEPADLETMAAELQRTNPAELLYPENFEPMSLIEH
RHGLRRRPLWEFELDTAKQQLNLQFGTRDLIGFGVEQAHLALRAAGCLLQYVKDTQRTSLPHIRGLTMERQQDGIIMDAA
TRRNLELTQNLSGGSENTLAAILDCSVTPMGSRMLKRWLHMPIRDIRVLTDRQQAIGGLQDIAAELQTPLRQVGDLERIL
ARLALRTARPRDLARMRHAFQQLPEIHRLLQPIDVPHVQNLLSQVGQFDELQDLLERAIVETPPVLVRDGGVIASGYNAE
LDEWRALADGATDYLDRLEIREREKLGLDTLKVGFNGVHGYYIQVSRGQSHLVPIHYVRRQTLKNAERYIIPELKEYEDK
VLTSKGKALAIEKGLYEEIFDLLLPHLPELQLSANALAELDVLANLAERAETLNYSCPTLSDKPGIKIMGGRHPVVEQVL
KEPFISNPLTLSPQRRMLIITGPNMGGKSTYMRQTALIVLLAHLGSYVPADQATIGPIDRIFTRVGAADDLASGRSTFMV
EMTETANILHNATEQSLVLMDEIGRGTSTYDGLSLAWACAENLASRIKAMTLFATHYFELTTLPEKMEGVVNVHLDALEH
GETIAFMHSVQEGAASKSYGLAVAALAGVPRDVIKRARQKLKELESLSNNAAASTIDGSQMTLLNEEIPPAVEALEALDP
DSLSPRQALEWIYRLKNMV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
mutS AAA80578.1 DNA mismatch repair protein Virulence SPI-1 Protein 0.0 79

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
YPD8_2937 YP_005510002.1 DNA mismatch repair protein MutS VFG0562 Protein 0.0 84