Gene Information

Name : phoB (YPD8_2803)
Accession : YP_005509869.1
Strain : Yersinia pestis D182038
Genome accession: NC_017160
Putative virulence/resistance : Virulence
Product : positive response regulator for pho regulon
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3547216 - 3547935 bp
Length : 720 bp
Strand : -
Note : -

DNA sequence : 
GTGACCGCTAACATACTGGCAGGGTTGATGATGGCAAGACGCATACTGGTGGTGGAAGATGAAGCACCAATCCGTGAGAT
GGTGTGCTTTGTGTTGGAGCAAAATGGCTACCAACCGTTAGAAGCCGAAGATTATGACAGCGCGGTAGCTCGCCTGTCGG
AGCCTTTTCCTGATTTAGTGCTGTTAGACTGGATGTTACCCGGCGGCTCGGGTATTCAGTTTATTAAACATATGAAACGT
GAAGCTTTGACCCGGGATATTCCGGTGATGATGCTGACCGCTCGTGGCGAAGAAGAAGATCGTGTGCGCGGTTTGGAAGT
GGGCGCAGATGATTATATTACCAAGCCTTTTTCACCTAAAGAGCTGGTAGCGCGGATCAAAGCGGTAATGCGGCGGATAT
CGCCAATGGCCGTTGAAGAAGTGATTGAAATGCAAGGGTTGAGCCTTGACCCTTCATCTCACAGGGTAATGGCGAATGAT
CAGGCGCTAGATATGGGGCCGACCGAGTTTAAATTATTACACTTCTTTATGACTCATCCCGAGCGTGTTTATAGCCGTGA
ACAGTTGCTTAATTATGTTTGGGGCACTAACGTTTATGTAGAAGATCGTACGGTTGATGTGCATATTCGTCGGTTACGCA
AGGCGCTTGAAACTGATGGTCACGATAAAATGGTACAAACTGTCCGGGGAACTGGATACCGTTTCTCAACGCGCTACTGA

Protein sequence : 
MTANILAGLMMARRILVVEDEAPIREMVCFVLEQNGYQPLEAEDYDSAVARLSEPFPDLVLLDWMLPGGSGIQFIKHMKR
EALTRDIPVMMLTARGEEEDRVRGLEVGADDYITKPFSPKELVARIKAVMRRISPMAVEEVIEMQGLSLDPSSHRVMAND
QALDMGPTEFKLLHFFMTHPERVYSREQLLNYVWGTNVYVEDRTVDVHIRRLRKALETDGHDKMVQTVRGTGYRFSTRY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 6e-34 41
CDB402_0209 YP_005126722.1 two-component system response regulator Not tested Not named Protein 2e-31 41
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 6e-34 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
phoB YP_005509869.1 positive response regulator for pho regulon HE999704.1.gene2815. Protein 5e-39 44
phoB YP_005509869.1 positive response regulator for pho regulon CP001918.1.gene5135. Protein 3e-24 42
phoB YP_005509869.1 positive response regulator for pho regulon CP001138.1.gene2239. Protein 2e-33 41
phoB YP_005509869.1 positive response regulator for pho regulon BAC0596 Protein 2e-33 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
phoB YP_005509869.1 positive response regulator for pho regulon VFG1563 Protein 3e-34 41
phoB YP_005509869.1 positive response regulator for pho regulon VFG1702 Protein 3e-34 41