Gene Information

Name : YPD8_0241 (YPD8_0241)
Accession : YP_005507324.1
Strain : Yersinia pestis D182038
Genome accession: NC_017160
Putative virulence/resistance : Virulence
Product : putative type III secretion apparatus protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 270691 - 271485 bp
Length : 795 bp
Strand : +
Note : -

DNA sequence : 
ATGACTGACGTCCTCCCCGGTCTAACCGCACTCGCATTAGCCATGATGCGGCCCTACGGTATCTTACTGATATTACCGCT
GTTTACCGCCCGCAGTTTGGGGAGCAGCTTATTGCGTAATGGCTTGATTGTTGCCATCGCGCTGCCGGTCACGCCGCTAT
TTTTATCCGCACCCATCATCACCAATAGTAGCCCGGTCACCTGGATTGGGGTGTTATGCACGGAGCTACTCATTGGGGTG
GTGATGGGGTTTGTCGCCGCATTGCCTTTCTGGGCTATGAATATGGCGGGTTTCCTGATCGATACTTTACGGGGGGCAAC
GATGTCCACGTTGTTTAACCCCGGTATGGGCGTCGAATCCTCCCTTTTTGGTGTGCTGTTTACCCAAATATTAACGGTAC
TGTTCCTGATTTCTGGCGGTTTTAATCAGGTGTTGGCGGCGTTGTACGGCTCGTACGATAGCTTACCCATCGGCCAGGGT
ATCCAGCCTGCTGCAGATCTATTGCTCTTTCTGCAAACTGAGTGGCAGATGATGTTCGAGCTTTGCTTGTGCTTTGCCCT
ACCGGCACTGCTGGTCATGGTGTTGGCTGATCTCTCTTTAGGATTAATTAACCGCTCGGCCCGGCAACTGAATGTCTTTT
TTCTGGCGATGCCCATTAAAAGCGCACTGGCGCTTTTTCTCTTACTGATCAGCCTGCCTTATGGCCTGCATCACTACCTG
TCCCGTATGAGCGATACTGAACAGAAGATTGGTACGTTGATCCCGTTGATTAAAGGGGGGAATGATGTCCACTGA

Protein sequence : 
MTDVLPGLTALALAMMRPYGILLILPLFTARSLGSSLLRNGLIVAIALPVTPLFLSAPIITNSSPVTWIGVLCTELLIGV
VMGFVAALPFWAMNMAGFLIDTLRGATMSTLFNPGMGVESSLFGVLFTQILTVLFLISGGFNQVLAALYGSYDSLPIGQG
IQPAADLLLFLQTEWQMMFELCLCFALPALLVMVLADLSLGLINRSARQLNVFFLAMPIKSALALFLLLISLPYGLHHYL
SRMSDTEQKIGTLIPLIKGGNDVH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
YPO0272 YP_002345354.1 type III secretion apparatus protein Virulence Not named Protein 4e-105 100
ssaT NP_805092.1 type III secretion protein Virulence SPI-2 Protein 1e-44 52
ssaT YP_216429.1 secretion system apparatus protein SsaT Virulence SPI-2 Protein 9e-45 52
ssaT NP_456107.1 putative type III secretion protein Virulence SPI-2 Protein 1e-44 52
ssaT CAA68201.1 secretion system apparatus, SsaT Virulence SPI-2 Protein 2e-44 51
ssaT NP_460386.1 type III secretion system apparatus protein Virulence SPI-2 Protein 3e-44 51

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
YPD8_0241 YP_005507324.1 putative type III secretion apparatus protein VFG0521 Protein 1e-44 51