Gene Information

Name : kdpA (YPD8_2353)
Accession : YP_005509421.1
Strain : Yersinia pestis D182038
Genome accession: NC_017160
Putative virulence/resistance : Unknown
Product : potassium-transporting ATPase subunit A
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2999465 - 3001153 bp
Length : 1689 bp
Strand : -
Note : -

DNA sequence :
ATGGTAGCGTCAGGATTTCTGCTTATTGCCAGCTTCATGCTGGTGTTGTTCGTGTTGTCCCGTCCGTTGGGTGGGTTTTT
AGCACGTTTGATTGAAGGTGAGCCCTTCTCTGCGCTGCAAAAAGTCGAGGCCGGTTTATGGCGTTGCAGTGGGGTGAAAA
ATGCAGAGATGAACGGCTGGCAATATGCTCTCGCTATTCTCTGCTTTAATCTACTGGGGATCGTCTTGCTGTTTGTGCTG
CTCATGACCCAAGGGTCATTACCGCTGAACCCCGAACATCTGCCGGGGATGTCATGGCATCTGGCACTCAATACCGCGGT
CAGTTTTGTGACTAACACCAATTGGCAAGCGTACAGCGGTGAGAACACCCTCAGTTATCTGAGCCAAATGGCGGGGCTAA
CCGTACAGAATTTCCTCTCCGCTGCCACTGGTATTGCCGTCGCCTTTGCACTGATCCGTGCCTTTGCACGCCATTCAGCC
ACCACACTGGGCAATGCTTGGGTCGATCTGGTCCGCATCACGCTGTATGTCTTACTCCCTATCGCCTTGATCATCGCCCT
TATTTTTGTCAGTCAGGGCGTATTGCAAAATCTGGATGACTACCTGCATATCACCACACTGGAAGGCGTGCAACAGACCT
TACCCATGGGCCCCGTAGCGTCGCAGGAAGCCATAAAAGTGCTGGGAACCAATGGCGGCGGTTTCTTTGGTGCAAACTCA
GCCCATCCGTTTGAAAACCCGACTGCATTCAGTAATTTTGTCCAAATGCTGGCCATTTTTCTGATCCCTTGCGCACTCTG
TTTTGCCTTCGGTCAGGTCGTCGGCGATAACCGTCAGGGGCACGCTCTTATCTGGGCCATGTCACTGATTTTTATCGTTG
CTGTGGTGGTGGTGATGTACGCCGAACTGGCGGGAAACCCGCATTTATCCCCGTTAGGGGCTGACAGCAATAGCAATATG
GAAGGTAAAGAGTCGCGCTTCGGTATTCTCGCCACCAGCCTGTATGCCGTAGTAACCACCGCCGCCTCCTGTGGTGCGGT
TAACGCGATGCATGACTCCTTCACTGCATTGGGTGGCATGATCCCCCTGTGGTTGATGCAGATTGGTGAGGTGGTGTTTG
GCGGCGTTGGTTCCGGTTTATACGGCATGCTGCTGTTCGTGCTGCTGACTGTCTTTATTGCTGGTCTGATGATTGGCCGC
ACACCTGAATATCTGGGTAAGAAAATCGACGTATTTGATATGAAAATGACCGCACTGGCCATTTTGGTGACCCCCACTAT
CGTGCTGTTAGGGACGGCGTTAGCACTCTGCACAGAGGCTGGACGGGCGGGGATCCTCAACCCCGGTGCGCACGGTTTTA
GTGAGGTGCTGTACGCCCTCTCCTCGGCGGCCAATAACAACGGCAGCGCTTTTGCGGGTCTGAGTGTCAACACCCCGTTT
TATAACCTGCTGCTGGCCGCCGCCATGTTTATCGGGCGCTTTGGCGTCATTCTGCCGGTGCTGGCCATTGCCAGTTCACT
GGTGGCGAAGAAACGGCAACCTGCGGGTAACGGCACCCTGCCAACGGGTGGGCTGTTGTTTATCGGTTTACTGATCGGAA
CCGTCTTATTAGTGGGCGCATTGACCTTTATCCCAGCATTGGCCCTGGGGCCGGTCGCTGAACATCTACAAGTCTGGTTA
GCACATTGA

Protein sequence :
MVASGFLLIASFMLVLFVLSRPLGGFLARLIEGEPFSALQKVEAGLWRCSGVKNAEMNGWQYALAILCFNLLGIVLLFVL
LMTQGSLPLNPEHLPGMSWHLALNTAVSFVTNTNWQAYSGENTLSYLSQMAGLTVQNFLSAATGIAVAFALIRAFARHSA
TTLGNAWVDLVRITLYVLLPIALIIALIFVSQGVLQNLDDYLHITTLEGVQQTLPMGPVASQEAIKVLGTNGGGFFGANS
AHPFENPTAFSNFVQMLAIFLIPCALCFAFGQVVGDNRQGHALIWAMSLIFIVAVVVVMYAELAGNPHLSPLGADSNSNM
EGKESRFGILATSLYAVVTTAASCGAVNAMHDSFTALGGMIPLWLMQIGEVVFGGVGSGLYGMLLFVLLTVFIAGLMIGR
TPEYLGKKIDVFDMKMTALAILVTPTIVLLGTALALCTEAGRAGILNPGAHGFSEVLYALSSAANNNGSAFAGLSVNTPF
YNLLLAAAMFIGRFGVILPVLAIASSLVAKKRQPAGNGTLPTGGLLFIGLLIGTVLLVGALTFIPALALGPVAEHLQVWL
AH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ef0087 AAM75290.1 EF0087 Not tested Not named Protein 2e-80 51
kdpA NP_814333.1 potassium-transporting ATPase subunit A Not tested Not named Protein 2e-80 51
unnamed BAB43902.1 potassium-transporting ATPase(A chain) Not tested Type-II SCCmec Protein 1e-62 47
SAR0070 YP_039538.1 potassium-transporting ATPase subunit A Not tested Type-II SCCmec Protein 2e-62 47
truncated-kdpA NP_370596.1 potassium-transporting ATPase subunit A Not tested Type-II SCCmec Protein 2e-62 47
kdpA NP_373308.2 potassium-transporting ATPase subunit A Not tested Type-II SCCmec Protein 2e-62 47
kdpA YP_190030.1 potassium-transporting ATPase subunit A Not tested Type-II SCCmec Protein 2e-62 47
kdpA YP_251948.1 potassium-transporting ATPase subunit A Not tested SCCmec Protein 2e-63 47