Gene Information

Name : YPD8_2330 (YPD8_2330)
Accession : YP_005509398.1
Strain : Yersinia pestis D182038
Genome accession: NC_017160
Putative virulence/resistance : Virulence
Product : urease alpha subunit
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2972479 - 2974218 bp
Length : 1740 bp
Strand : +
Note : -

DNA sequence :
ATGCCTCAAATTTCTCGGCAAGAATACGCGGGTCTATTTGGCCCAACAACTGGCGATAAAATCCGTTTGGGTGATACCAA
TCTGTTTATCGAAATCGAAAAAGACTTGCGTGGATATGGTGAAGAGTCGGTTTACGGTGGTGGGAAATCGCTGCGTGACG
GGATGGGGGCCAACAATAATCTGACCCGCGATAATGGTGTGCTTGACCTGGTGATTACCAACGTCACGATTGTCGATGCT
CGCTTAGGGGTGATTAAAGCTGACGTCGGTATCCGCGATGGCAAAATCGCCGGTATCGGTAAGAGCGGTAACCCCGGTGT
TATGGATGGGGTTACGCAGGGTATGGTGGTCGGTGTGAGCACCGATGCTATCTCTGGTGAGCATTTGATTCTTACTGCCG
CCGGTATCGATAGCCATATTCATCTCATCTCCCCGCAACAGGCCTATCATGCGCTGTCCAACGGTGTTGCAACATTCTTT
GGTGGGGGGATTGGTCCAACGGATGGCACTAACGGGACAACCGTAACACCAGGGCCGTGGAATATCCGTCAAATGCTGCG
TTCGATAGAGGGGTTACCTGTCAACGTTGGTATTTTGGGGAAAGGTAATTCATACGGGCGCGGCCCGTTGCTGGAACAGG
CTATTGCCGGTGTTGTGGGCTATAAAGTTCATGAAGACTGGGGCGCGACGGCGAATGCTTTGCGTCATGCGCTGCGGATG
GCGGATGAGGTGGATATTCAGGTTTCGGTTCATACCGATAGCCTGAATGAATGTGGTTATGTAGAAGATACTATCGATGC
GTTCGAAGGCCGCACGATCCACACGTTCCACACCGAAGGGGCGGGTGGGGGCCATGCGCCGGATATTATTCGGGTGGCCA
GCCAAACTAACGTACTGCCAAGTTCAACCAACCCCACCCTGCCGTATGGTGTTAACAGCCAGGCTGAGCTGTTTGACATG
ATTATGGTGTGTCACAACCTTAACCCGAACGTACCTGCTGACGTCTCCTTTGCCGAAAGCCGTGTGCGCCCAGAAACGAT
TGCTGCTGAAAACGTTCTGCACGATATGGGCGTTATCTCCATGTTCTCCAGTGACTCACAAGCCATGGGGCGAGTGGGGG
AGAACTGGTTGCGTATTTTGCAAACCGCGGATGCGATGAAAGCGGCTCGGGGCAAATTGCCGGAAGATGCGGCGGGTAAC
GATAATTTCCGCGTGCTGCGCTATGTGGCAAAAATCACCATTAACCCCGCGATTACACAGGGGGTTAGCCATGTTATCGG
ATCGGTTGAAGTGGGCAAAATGGCCGATCTGGTGCTATGGGATCCTCGCTTCTTTGGTGCGAAACCGAAGATGGTTATCA
AGGGGGGCATGATTAACTGGGCCGCGATGGGCGATCCAAATGCGTCACTGCCAACACCACAGCCAGTGTTCTACCGCCCA
ATGTTTGGCGCGATGGGCAAAACGCTACAAGACACTTGTGTCACTTTCGTTTCTCAGGCTGCACTTGATGATGGTGTGAA
AGAGAAAGCGGGGCTGGATCGCCAAGTGATAGCGGTTAAAAACTGCCGCACGATCTCCAAACGTGATCTGGTGCGTAATG
ACCAAACACCAAACATTGAAGTGGATCCTGAAACCTTTGCAGTAAAAGTGGATGGGGTACATGCCACCTGTGAGCCAATT
GCAACTGCGTCGATGAATGCAGCGCTATTTCTTTGGCTAACCTCTCTTTGGCTAATCTGA

Protein sequence :
MPQISRQEYAGLFGPTTGDKIRLGDTNLFIEIEKDLRGYGEESVYGGGKSLRDGMGANNNLTRDNGVLDLVITNVTIVDA
RLGVIKADVGIRDGKIAGIGKSGNPGVMDGVTQGMVVGVSTDAISGEHLILTAAGIDSHIHLISPQQAYHALSNGVATFF
GGGIGPTDGTNGTTVTPGPWNIRQMLRSIEGLPVNVGILGKGNSYGRGPLLEQAIAGVVGYKVHEDWGATANALRHALRM
ADEVDIQVSVHTDSLNECGYVEDTIDAFEGRTIHTFHTEGAGGGHAPDIIRVASQTNVLPSSTNPTLPYGVNSQAELFDM
IMVCHNLNPNVPADVSFAESRVRPETIAAENVLHDMGVISMFSSDSQAMGRVGENWLRILQTADAMKAARGKLPEDAAGN
DNFRVLRYVAKITINPAITQGVSHVIGSVEVGKMADLVLWDPRFFGAKPKMVIKGGMINWAAMGDPNASLPTPQPVFYRP
MFGAMGKTLQDTCVTFVSQAALDDGVKEKAGLDRQVIAVKNCRTISKRDLVRNDQTPNIEVDPETFAVKVDGVHATCEPI
ATASMNAALFLWLTSLWLI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ureC NP_286680.1 urease subunit alpha Virulence TAI Protein 6e-149 58
ureC NP_287088.1 urease subunit alpha Not tested TAI Protein 6e-149 58
ureC YP_005684266.1 Urease alpha subunit Not tested PiCp 7 Protein 5e-138 57
ureC YP_003784325.1 urease subunit alpha Not tested PiCp 7 Protein 2e-138 56
ureC YP_005686358.1 Urease alpha subunit Not tested PiCp 7 Protein 2e-138 56
ureC YP_005682174.1 Urease alpha subunit Not tested PiCp 7 Protein 2e-138 56

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
YPD8_2330 YP_005509398.1 urease alpha subunit VFG0270 Protein 2e-148 59