Gene Information

Name : YPD8_1879 (YPD8_1879)
Accession : YP_005508953.1
Strain : Yersinia pestis D182038
Genome accession: NC_017160
Putative virulence/resistance : Unknown
Product : insertion sequence IS100, ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2400988 - 2401722 bp
Length : 735 bp
Strand : -
Note : -

DNA sequence :
GTGCAACTGGAAAGCCTTATAAGCGCAGCGCCTGCGCTGTCACAACAGGCAGTAGACCAGGAATGGAGTTATATGGACTT
CCTGGAGCATCTGCTTCATGAAGAAAAACTGGCACGTCATCAACGTAAACAGGCGATGTATACCCGAATGGCAGCCTTCC
CGGCGGTGAAAACGTTCGAAGAGTATGACTTCACATTCGCCACCGGAGCACCGCAGAAGCAACTCCAGTCGTTACGCTCA
CTCAGCTTCATAGAACGTAATGAAAATATCGTATTACTGGGGCCATCAGGTGTGGGGAAAACCCATCTGGCAATAGCGAT
GGGCTATGAAGCAGTCCGTGCAGGTATCAAAGTTCGCTTCACAACAGCAGCAGATCTGTTACTTCAGTTATCTACGGCAC
AACGTCAGGGCCGTTATAAAACGACGCTTCAGCGTGGAGTAATGGCCCCCCGCCTGCTCATCATTGATGAAATAGGCTAT
CTGCCGTTCAGTCAGGAAGAAGCAAAGCTGTTCTTCCAGGTCATCGCTAAACGTTACGAAAAGAGCGCAATGATCCTGAC
ATCCAATCTGCCGTTCGGGCAGTGGGATCAAACGTTCGCCGGTGATGCAGCACTGACCTCAGCGATGCTGGACCGTATCT
TACACCACTCACATGTCGTTCAAATCAAAGGAGAAAGCTATCGACTCAGACAGAAACGAAAGGCCGGGGTTATAGCAGAA
GCTAATCCTGAGTAA

Protein sequence :
MQLESLISAAPALSQQAVDQEWSYMDFLEHLLHEEKLARHQRKQAMYTRMAAFPAVKTFEEYDFTFATGAPQKQLQSLRS
LSFIERNENIVLLGPSGVGKTHLAIAMGYEAVRAGIKVRFTTAADLLLQLSTAQRQGRYKTTLQRGVMAPRLLIIDEIGY
LPFSQEEAKLFFQVIAKRYEKSAMILTSNLPFGQWDQTFAGDAALTSAMLDRILHHSHVVQIKGESYRLRQKRKAGVIAE
ANPE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
y1094 CAD33719.1 ORF B protein Not tested PAI I 536 Protein 5e-86 100
y1093 CAC43411.1 IS100 transposase; transposase ORFA Not tested PAI III 536 Protein 7e-113 99
y1093 CAD66188.1 transposase Orf B, insertion element IS100 Not tested PAI III 536 Protein 4e-112 99
unnamed CAB46598.1 IS100 transposase Not tested HPI Protein 7e-113 99
s0036 CAD33774.1 ORF B protein Not tested PAI I 536 Protein 7e-113 99
y1093 CAD42087.1 OrfB protein of IS100 transposase Not tested PAI II 536 Protein 7e-113 99
YPTB1586 YP_070114.1 transposase/IS protein Not tested HPI Protein 9e-113 99
orfB CAE85183.1 OrfB protein, transposase, IS100 Not tested PAI V 536 Protein 7e-113 99
unnamed CAA21402.1 - Not tested HPI Protein 9e-113 99
api84 CAF28558.1 putative transposase Not tested YAPI Protein 7e-113 99
y2410 NP_669717.1 transposase/IS protein Not tested HPI Protein 8e-113 99
aec58 AAW51741.1 Aec58 Not tested AGI-3 Protein 6e-113 99
YPO1901 YP_002346891.1 transposase/IS protein Not tested HPI Protein 8e-113 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
YPD8_1879 YP_005508953.1 insertion sequence IS100, ATP-binding protein VFG1460 Protein 3e-86 100
YPD8_1879 YP_005508953.1 insertion sequence IS100, ATP-binding protein VFG1606 Protein 4e-113 99
YPD8_1879 YP_005508953.1 insertion sequence IS100, ATP-binding protein VFG1663 Protein 2e-112 99
YPD8_1879 YP_005508953.1 insertion sequence IS100, ATP-binding protein VFG1515 Protein 4e-113 99
YPD8_1879 YP_005508953.1 insertion sequence IS100, ATP-binding protein VFG1627 Protein 4e-113 99