Gene Information

Name : YPD8_1835 (YPD8_1835)
Accession : YP_005508911.1
Strain : Yersinia pestis D182038
Genome accession: NC_017160
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2328811 - 2329524 bp
Length : 714 bp
Strand : -
Note : -

DNA sequence : 
ATGACCTCGTCAATCATAGGGATGAAACCTGAACATCTGGCTGATGCCGTTATTGAAACCCGACATTTGTATAAGCGCTT
TGGTCAAGTTACGGCACTGGAAGACATCAATATTCGTATTAACCGTGGTGAGTTTGTGGCGATTATGGGGGCATCAGGCT
CGGGAAAAACGACATTAATGAATATCCTGACTTGCCTGGATACGGTAAGTGAAGGCCAAGTATTACTCGACGGAATTGAT
GCCGCAGGTTTGGATGAAGAGGGCCGCCGACAATTTAGAGCCGATAAGATAGGGTTGGTCTTCCAGCAATTTCACCTTAT
TCCTTACCTTACTGCCTTAGAAAATATCATGTTGGCCCAGCATTATCACAGTGTGGTCGATGAAGAGGCCGCCAGACAAG
TATTGGAACAAGTGGGGATGACACCACGTATGGGCCATTTACCTAGCCAACTATCCGGTGGCGAACAGCAACGGGTATGT
ATTGCACGGGCGTTGGTGAATCAACCGCCGATCATTTTTGCCGATGAACCGACCGGCAACCTGGATGAAGAGAATGAACA
GCGAGTCTTGGAATTGCTAAACCATATCCATCGTCAAGGCCGTACTATTGTCATGGTGACCCATAATCCAGATTTAAGCT
GTGTTGCTGACCGGGTTATCCGGCTGCAACATGGTAAATATCTTGATGAAAAGAGCCGCCATCATGTGGCGTAA

Protein sequence : 
MTSSIIGMKPEHLADAVIETRHLYKRFGQVTALEDINIRINRGEFVAIMGASGSGKTTLMNILTCLDTVSEGQVLLDGID
AAGLDEEGRRQFRADKIGLVFQQFHLIPYLTALENIMLAQHYHSVVDEEAARQVLEQVGMTPRMGHLPSQLSGGEQQRVC
IARALVNQPPIIFADEPTGNLDEENEQRVLELLNHIHRQGRTIVMVTHNPDLSCVADRVIRLQHGKYLDEKSRHHVA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-28 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-29 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-29 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-29 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
YPD8_1835 YP_005508911.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 2e-31 45
YPD8_1835 YP_005508911.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 2e-41 44
YPD8_1835 YP_005508911.1 ABC transporter ATP-binding protein NC_012469.1.7685735. Protein 2e-39 44
YPD8_1835 YP_005508911.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 1e-34 42