|
Name : psaC (YPD8_0991) Accession : YP_005508071.1 Strain : Yersinia pestis D182038 Genome accession: NC_017160 Putative virulence/resistance : Virulence Product : outer membrane usher protein PsaC Function : - COG functional category : - COG ID : - EC number : - Position : 1293837 - 1296077 bp Length : 2241 bp Strand : - Note : - DNA sequence : TTGAAAAAATTAATAGTTCAATTTACTACTATTACTCTATTGATGAGCACTTCATTTTTAGTGGGTGCCCAGCGTTATTC TTTTGATCCCAATCTGCTAGTGGATGGCAATAACAACACTGATACCTCGTTATTTGAACAGGGCAATGAATTACCGGGCA CCTATTTGGTGGATATTATCTTGAATGGGAATAAAGTGGACTCTACGAATGTGACATTTCATTCGGAGAAATCGCCATCA GGAGAGCCTTTCTTGCAATCTTGCTTAACCAAGGAGCAGCTATCCCGCTATGGTGTGGATGTTGATGCCTATCCCGAGTT ATCTCCAGCATTAAAAAACTCACAGACAAACCCGTGTGTCAATTTAGCCGCTATCCCTCAGGCCAGTGAAGAGTTCCAAT TTTATAATATGCAGTTGGTACTGAGTATTCCACAAGCGGCTTTACGGCCTGAAGGTGAAGTGCCAATAGAACGCTGGGAT GATGGTATTACGGCTTTTTTGCTGAACTACATGGCAAATATCAGTGAAACCCAGTTTCGTCAAAATGGTGGATACCGGCG TTCACAATATATCCAGTTATATCCCGGTTTAAATTTGGGGGCGTGGCGTGTTCGTAATGCGACCAACTGGAGTCAATCTG GCGATAGGGGGGGTAAATGGCAAAGTGCTTATACCTATGCCACTCGTGGGATTTATCGTTTAAAGAGCCGGGTGACCTTA GGGGAGAGTTACACCCCAGGTGATTTTTTCGACAGCATTCCCTTTCGTGGCGTGATGTTGGGGGACGATCCTAATATGCA GCCAAGTAACCAGCGGGATTTTATACCGGTGGTGCGTGGTATTGCCCGTAGTCAGGCGCAGGTGGAAATCAGACAAAATG GTTATCTGATTTATAGTACGGTGGTGCCGCCGGGGCCGTTTGAACTCTCTGACGTGATCCCGAGTAAATCAGGCAGTGAC CTACATGTTAGGGTGCTGGAAAGTAACGGGGCATCGCAGGCGTTTATTGTGCCTTATGAGGTGCCAGCCATTGCATTGCG CAAAGGGCATTTGCGATACAATCTGGTGGCAGGGCAGTATCGCCCCGCCAATGCTGATGTTGAGACGCCTCCGGTCGCTC AGGCAACCGTCGCCTACGGCTTGCCGTGGAACTTGACCGCATTTATCGGTGAGCAGTGGTCGCGGCATTATCAGGCAACC TCTGCCGGATTAGGGGGGCTATTGGGGGAGTATGGCGCATTGTCATCCAGTATCACGCAGGCAACCAGTCAGTATCACCA TCAACAACCGGTTAAAGGGCAAGCCTGGGAGGTTCGATACAACAAAACCTTACAAGCCTCTGATACGTCATTTTCATTGG TGAATAGTCAATACAGCACTAATGGTTTCAGTACGTTATCTGATGTATTACAAAGTTACCGGCAGAGCGGGAGTGGCGAT AATAGAGATAAAATTGACGAAAATTCTCGGTCAAGGGATTTGCGTAACCAAATCAGTGCGGTCATCGGGCAGTCATTGGG CAAGTTTGGCTACCTGAACCTTAATTGGTCGCGGCAGGTCTACCGTGGGCCGATTCCGGCTAAGAATTCATTGGGAATAC ACTATAACCTCAATGTCGGTAATAGTTTTTGGGCACTGAGTTGGGTGCAAAATGCGAATGAGAACAAGAATGATCGAATA TTGAGTTTGTCTGTCAGTATTCCGCTGGGAGGTCATCACGATACTTATGCTTCCTATAGAATGACATCTTCCAACGGGAG CAATGATCATGAGATAGGAATGTACGGCCAGGCTTTTGACTCTCGCTTGAGTTGGAGTGTGCGTCAGGCAGAGCATTATG GTCAACCCAACTCAGGGCATAACAGCGGCTCACTCAGGTTGGGCTGGCAGGGTTCCTATGGCAATATCGCGGGAAATTAC TACTATACTCCGAGCATACGTCAGTTATCCGCTGATGTTTCCGGAGGGGCGATCATCCATCGGCATGGGCTGACATTAGG GCCGCAAATCAATGGCACCTCCGTGCTGGTTGAAGTTCCGGGCGTCGGCGTGGGTGACCACCACAGAAGATCGCCGTCTG AAAACAGATTTTCGCGGTTACAGCATTGTGTCTGGCCTCTCTCCTTATCAGGAGCACGATATCGTGTTGGAAACTGCAGA TTTACCGCCGGATGCGGAGGTGGCAAAAACAGATACCAAGGTCTTGCCGACCGAGGGGGCGATTGTTCGTGCCAGTTTTA G Protein sequence : MKKLIVQFTTITLLMSTSFLVGAQRYSFDPNLLVDGNNNTDTSLFEQGNELPGTYLVDIILNGNKVDSTNVTFHSEKSPS GEPFLQSCLTKEQLSRYGVDVDAYPELSPALKNSQTNPCVNLAAIPQASEEFQFYNMQLVLSIPQAALRPEGEVPIERWD DGITAFLLNYMANISETQFRQNGGYRRSQYIQLYPGLNLGAWRVRNATNWSQSGDRGGKWQSAYTYATRGIYRLKSRVTL GESYTPGDFFDSIPFRGVMLGDDPNMQPSNQRDFIPVVRGIARSQAQVEIRQNGYLIYSTVVPPGPFELSDVIPSKSGSD LHVRVLESNGASQAFIVPYEVPAIALRKGHLRYNLVAGQYRPANADVETPPVAQATVAYGLPWNLTAFIGEQWSRHYQAT SAGLGGLLGEYGALSSSITQATSQYHHQQPVKGQAWEVRYNKTLQASDTSFSLVNSQYSTNGFSTLSDVLQSYRQSGSGD NRDKIDENSRSRDLRNQISAVIGQSLGKFGYLNLNWSRQVYRGPIPAKNSLGIHYNLNVGNSFWALSWVQNANENKNDRI LSLSVSIPLGGHHDTYASYRMTSSNGSNDHEIGMYGQAFDSRLSWSVRQAEHYGQPNSGHNSGSLRLGWQGSYGNIAGNY YYTPSIRQLSADVSGGAIIHRHGLTLGPQINGTSVLVEVPGVGVGDHHRRSPSENRFSRLQHCVWPLSLSGARYRVGNCR FTAGCGGGKNRYQGLADRGGDCSCQF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| safC | NP_454907.1 | outer-membrane fimbrial usher protein | Not tested | SPI-6 | Protein | 5e-140 | 45 |
| afaC | AAD44022.2 | AfaC | Virulence | PAI-I AL862 | Protein | 4e-129 | 45 |
| afaC | ADD91743.1 | putative AfaC-VIII usher protein | Not tested | PAI-I AL862 | Protein | 1e-129 | 45 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| psaC | YP_005508071.1 | outer membrane usher protein PsaC | VFG0944 | Protein | 2e-126 | 44 |
| psaC | YP_005508071.1 | outer membrane usher protein PsaC | VFG0853 | Protein | 3e-127 | 43 |
| psaC | YP_005508071.1 | outer membrane usher protein PsaC | VFG0849 | Protein | 7e-117 | 41 |
| psaC | YP_005508071.1 | outer membrane usher protein PsaC | VFG0857 | Protein | 1e-112 | 41 |
