Gene Information

Name : YPD4_0938 (YPD4_0938)
Accession : YP_005504150.1
Strain : Yersinia pestis D106004
Genome accession: NC_017154
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1206745 - 1207572 bp
Length : 828 bp
Strand : -
Note : -

DNA sequence : 
ATGATTAAACTCACCCACATCAGCAAAGTGTTCCAGCAGGGTTCGCGCACTATTACCGCGCTATCAGACGTGAGTCTTCA
CGTCCCTGCCGGGCAAATTTATGGCGTTATCGGCGCTTCTGGCGCAGGTAAAAGTACCCTGATTCGGTGCGCTAATATGT
TAGAACGGCCAACCAGCGGTCAAGTTCTGGTTGATGACCAAGATCTGACCACCTTGTCTGAAGGCCAATTAACACGCGCG
CGTCGTCAGATTGGCATGATTTTTCAGCACTTTAATTTACTCTCATCACGCACTGTATACGGCAATATTGCATTGCCTCT
TGAGTTGGACAATACATCGCGTGCAGATATAAAGAAGAGAGTGAATGAATTACTGGATTTAGTAGGGTTGACCGATAAGC
AAGATGCTTACCCCGCTAATCTGTCCGGTGGGCAAAAACAGCGGGTCGCGATCGCTCGCGCGCTGGCCAGTAATCCTAAA
GTTTTGCTGTGTGATGAAGCCACCAGCGCATTAGACCCAGCCACCACCCGCTCAATATTGGAGCTGCTAAAAGATATTAA
CCGCCGTTTGGGGTTAACGATTTTGCTTATCACTCATGAGATGGATGTCGTGAAACGCATCTGTGATCAAGTTGCAGTAA
TAAGTGAAGGCAAACTGATTGAAAAAGACAGTGTCAGTGAGGTGTTCTCTCATCCCAAGACACCATTAGCACAACAATTT
ATTCAATCCAGCCCTGCATTTGGATATTCCGGAAGATTACGCCAAACGTATGAGCCCGGAGCCAACGGTAGATCACGTCC
CGCTTCTGAAGCTGGAGTTCACCGGTAA

Protein sequence : 
MIKLTHISKVFQQGSRTITALSDVSLHVPAGQIYGVIGASGAGKSTLIRCANMLERPTSGQVLVDDQDLTTLSEGQLTRA
RRQIGMIFQHFNLLSSRTVYGNIALPLELDNTSRADIKKRVNELLDLVGLTDKQDAYPANLSGGQKQRVAIARALASNPK
VLLCDEATSALDPATTRSILELLKDINRRLGLTILLITHEMDVVKRICDQVAVISEGKLIEKDSVSEVFSHPKTPLAQQF
IQSSPAFGYSGRLRQTYEPGANGRSRPASEAGVHR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAS0419 YP_042546.1 ABC transporter ATP-binding protein Not tested vSa¥á Protein 9e-70 58
SAR0461 YP_039910.1 ABC transporter ATP-binding protein Not tested vSa¥á Protein 4e-70 58

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
YPD4_0938 YP_005504150.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 3e-37 43
YPD4_0938 YP_005504150.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 3e-29 41