Gene Information

Name : YPD4_3420 (YPD4_3420)
Accession : YP_005506627.1
Strain : Yersinia pestis D106004
Genome accession: NC_017154
Putative virulence/resistance : Unknown
Product : putative fimbrial protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4339374 - 4339904 bp
Length : 531 bp
Strand : +
Note : -

DNA sequence :
ATGAAAAAAATTACTTTAGCTATCGCGTTATTCTCGGCATCTACAACGGTTGCCATGTCTGCCAGTAATAATACGATTAC
GTTCCAAGGGGAAGTCACAGCACAAACCTGTTCTGTTACCGTAAACGGCCTTGAAGCAAATCCAGTTGTCTTGTTGCCTA
CAGTATCAAGTAGCGATTTAGACGCTTCCGGCCAAACTAAAGGCAAAACAACCTTTACGCTAGGTGTGTCTGGCTGTACA
TCAGGATCAGATGATCTTGATATCAAAACTGTTTTCATCGGTAGCCTGGTTACTGCTACTGGTAATTTACAAAATACAGG
TACCGCAGGGAACGTTGAACTTCAATTATTGAAGGATGCCACGACAACAACGGGTATCGACCTGAATAGTGGTTTGGCAC
AAGACGGTATCGTGTTGCTAGCAGGTGATACATCTGCGGAGCATGATTTTGCTGTTCAGTATTATGCCACTGGGCAATCA
ACACCAGGGTCTGTCATTGCATCTGTACAGTATGCCGTTTCTTACTTGTAA

Protein sequence :
MKKITLAIALFSASTTVAMSASNNTITFQGEVTAQTCSVTVNGLEANPVVLLPTVSSSDLDASGQTKGKTTFTLGVSGCT
SGSDDLDIKTVFIGSLVTATGNLQNTGTAGNVELQLLKDATTTTGIDLNSGLAQDGIVLLAGDTSAEHDFAVQYYATGQS
TPGSVIASVQYAVSYL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cupD1 AAP84171.1 putative fimbrial protein precursor Not tested PAPI-1 Protein 4e-22 42