Gene Information

Name : YPD4_3073 (YPD4_3073)
Accession : YP_005506280.1
Strain : Yersinia pestis D106004
Genome accession: NC_017154
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3893723 - 3894811 bp
Length : 1089 bp
Strand : +
Note : -

DNA sequence : 
ATGGCCGGTACAGACAGGTCAACATGCACTGATGTAAGTGTGGTTGAGGATGTAAGTGGGGTTGAGAATGTAAATGGGGT
TGAGGCAAGACCCGAAGGGCAGGCATTGGATGTTTCACGTTATAACTTTTTTCAATTGGTCGAATTGCTCAACCAATTGG
CGGTAGCGTGGCAAGGTGCGGCCCCTGTGGCGACCCCAGCCAATGAAGCCATCCGTTTTAAATCGACCGCCAGTTTAGCA
TTCCCGACCAGAGATGTGATCGCACTGGACACCTCCGCCCGAGGTCAATTTGAGTTAGAGGTCTCTTTCCTTGGATTGCA
TGGCAGCCAATCGCCGCTACCAGGATATTACCTCGATTCGTTAGCGTGGGAGGATGCGCAGAATGAGAACCGGCTAACGG
ATTTCATGAACGTATTCAACCACCGCCTGTTAACGCTACTGCATCAGATTTGGCGTAAATACCGTTACTACATCTGCTTT
GACAATGGCGGTGATGATGCATTTTCACAACGCATGTTCTCGCTGGTGGGGTTAGGTAGCGAGGTCGTCCGCAATAAATT
GCAGATCAATCACAGCAAAATGCTGGCTTATGCAGGGCTGCTGGCCAGCCCCGGCAGAGCACCTGAAGTGATTTGCAGCC
TTGTCTCACATTGCTTCAATTTGCCAGATATCACCTTACACAGTTGGCAGCTACGCAAAGTGGATATTGCCCCCTCACAG
CAGAATCGCTTGGGGACGAGGGTGAAAGTCCGTGGCAAGAAATATGATGAAAAATCAGTGCTTGGCGTTAATTTCTCCAT
CGGTTCACGGGTTGCGGATCGTAGCGGGAAATTCTTGTTGTGCATCAATAAGCTGACGCGAGAACAGTTCTTATCCTTTT
TACCCAACGGGGCTAATTACGCCTCGTTAGTGATGTTTGTCGCCTTCATTATGCGCGATCAATTCGCGTGGGATTTACGC
CTTGGGTTGGCCGAGCAACAGGTGGGCGGGATGGTGTTGGGAACCGAGCAAAATAGCCTATTGGGCTGGACCAGTATCCT
CGGCGATCCCGAACAGAAACCCAGCGTAACGATTGGTGTAATGGAATAA

Protein sequence : 
MAGTDRSTCTDVSVVEDVSGVENVNGVEARPEGQALDVSRYNFFQLVELLNQLAVAWQGAAPVATPANEAIRFKSTASLA
FPTRDVIALDTSARGQFELEVSFLGLHGSQSPLPGYYLDSLAWEDAQNENRLTDFMNVFNHRLLTLLHQIWRKYRYYICF
DNGGDDAFSQRMFSLVGLGSEVVRNKLQINHSKMLAYAGLLASPGRAPEVICSLVSHCFNLPDITLHSWQLRKVDIAPSQ
QNRLGTRVKVRGKKYDEKSVLGVNFSIGSRVADRSGKFLLCINKLTREQFLSFLPNGANYASLVMFVAFIMRDQFAWDLR
LGLAEQQVGGMVLGTEQNSLLGWTSILGDPEQKPSVTIGVME

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec22 AAQ96716.1 Aec22 Not tested AGI-1 Protein 3e-91 57
aec22 YP_851423.1 hypothetical protein Not tested PAI II APEC-O1 Protein 4e-91 57

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
YPD4_3073 YP_005506280.1 hypothetical protein VFG2079 Protein 7e-62 41