Gene Information

Name : arsB (YPD4_2932)
Accession : YP_005506139.1
Strain : Yersinia pestis D106004
Genome accession: NC_017154
Putative virulence/resistance : Resistance
Product : arsenical pump membrane protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3723752 - 3725041 bp
Length : 1290 bp
Strand : +
Note : -

DNA sequence : 
ATGTTGTTGGCTGGTGCTATTTTTATCCTGACTATCGTGTTAGTTATCTGGCAACCCAAAGGGTTAGGGATTGGTTGGAG
TGCCATGCTGGGGGCAGGACTGGCATTACTCACTGGCGTGGTACATGTGAGTGATATTCCCGTGGTCTGGCAAATTGTCT
GGAACGCCACGGCGACTTTTATCGCCATCATCATCATCAGCCTGTTATTGGATGAGTCGGGGTTCTTTGAATGGGCAGCC
TTACATGTCGCACGGTGGGGTAATGGCCATGGTCGCCGCCTGTTTACTTACATCATCTTACTCGGCGCGGCAGTCGCTGC
CCTGTTTGCCAATGATGGCGCGGCGCTGATCCTCACGCCGATTGTCATTGCCATGCTATTGGCGCTGGGGTTCGGCCGTG
GCGCAACATTAGCCTTTGTGATGGCAGCCGGGTTTATTGCCGATACTGCCAGCTTGCCGCTTATCGTGTCGAACCTGGTG
AATATAGTTTCTGCTGACTTCTTTAACCTCGGGTTCACTGAATACGCGGCGGTGATGGTGCCAGTCAATCTGGTCGCCGT
TATCGCCACGCTGGCGATGCTACATCTATTTTTTCGTAAAGACATTCCGGCGGTTTATGATTTATCACTGCTGAAAGCCC
CGCAAGCGGCTATCCGCGATATGAATACGTTCAAAACCGGCTGGTTGGTCCTTGCCCTACTGCTGATCGGGTTCTTTGCT
CTGGAACCGCTCGGTGTTCCAGTCAGTTTGGTGGCCGCCGTCGGTGCGCTGATTTTGTTGGCTGTAGCGAAAAAAGGACA
TGCCATCAATACGGGAAAAGTGCTACGTGGTGCACCTTGGCAAATTGTTATTTTTTCATTAGGGATGTATCTGGTGGTTT
ATGGTCTGCGTAATGCGGGTCTGACCCACTATATTTCAGCGTTGCTAAACCGACTGGGTGAACAGGGGCTGTGGGCGTCA
ACTTTAGGGACTGGCTTCTTAACCGCGTTTCTCTCTTCCATTATGAATAATTTACCCACCGTTCTGGTAGGGGCACTTTC
TATCGAAGGCAGCACGGCAACCGGGTTAATTAAAGAGGCGATGATTTATGCCAATGTTATTGGTAGCGATCTCGGGCCGA
AAATCACCCTTATAGGTAGCCTGGCCACTTTATTGTGGCTGCATGTTTTGTCGCAAAAAAATATGACCATCACTTGGGGA
TATTATTTCCGAGTAGGGATTATCATGACCCTTCCAGTGCTATTGGTGACGTTGAGCGCGCTCGCACTACGATTGTCCGT
ATCGATGTAA

Protein sequence : 
MLLAGAIFILTIVLVIWQPKGLGIGWSAMLGAGLALLTGVVHVSDIPVVWQIVWNATATFIAIIIISLLLDESGFFEWAA
LHVARWGNGHGRRLFTYIILLGAAVAALFANDGAALILTPIVIAMLLALGFGRGATLAFVMAAGFIADTASLPLIVSNLV
NIVSADFFNLGFTEYAAVMVPVNLVAVIATLAMLHLFFRKDIPAVYDLSLLKAPQAAIRDMNTFKTGWLVLALLLIGFFA
LEPLGVPVSLVAAVGALILLAVAKKGHAINTGKVLRGAPWQIVIFSLGMYLVVYGLRNAGLTHYISALLNRLGEQGLWAS
TLGTGFLTAFLSSIMNNLPTVLVGALSIEGSTATGLIKEAMIYANVIGSDLGPKITLIGSLATLLWLHVLSQKNMTITWG
YYFRVGIIMTLPVLLVTLSALALRLSVSM

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
arsB2 YP_001007633.1 arsenical pump membrane protein Not tested YAPI Protein 1e-148 85
arsB YP_252017.1 arsenical pump membrane protein Not tested SCCmec Protein 4e-101 58
arsB YP_005754065.1 arsenical pump membrane protein Not tested Type-XI SCCmec Protein 4e-97 57
SH0109 YP_252024.1 arsenical pump membrane protein Not tested SCCmec Protein 2e-100 57

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
arsB YP_005506139.1 arsenical pump membrane protein BAC0578 Protein 3e-152 87
arsB YP_005506139.1 arsenical pump membrane protein BAC0576 Protein 1e-150 86
arsB YP_005506139.1 arsenical pump membrane protein BAC0031 Protein 6e-143 84
arsB YP_005506139.1 arsenical pump membrane protein BAC0577 Protein 1e-144 81
arsB YP_005506139.1 arsenical pump membrane protein BAC0574 Protein 3e-100 58
arsB YP_005506139.1 arsenical pump membrane protein BAC0575 Protein 3e-100 57