Gene Information

Name : YPD4_2927 (YPD4_2927)
Accession : YP_005506136.1
Strain : Yersinia pestis D106004
Genome accession: NC_017154
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3717519 - 3719102 bp
Length : 1584 bp
Strand : -
Note : -

DNA sequence :
ATGTCAAATAAAACAATAGCGTTCGCGTTAGTAGTGGCATCATCAGCCCCTGTTATCGCAGCAGATAATGACAATATTAT
GGTTGTTACCGCATCGGGATATGAACAGAAGATCAGAGAGGCTGCGGCAAGCATCTCGGTCATTAGCCAAAATGAATTAC
GTCAGCGCAATTACAACGATTTGGCGCAAGCGCTGAGTGATGTTGAAGGTGTTGACGTCAATAGCAGCACGGGGAAAACC
GGGGGGCTGGATATCAGTATTCGTGGTATGCCCAGCGCTTATACCCTGATATTGGTGGATGGGATCCGGCAAAATGGCAC
TTCCGATGTAACGCCAAATGGCTTTGGTGCCATGAATACCAGCTTTATGCCCCCGCTATCGGCCATTGAGCGCATCGAAG
TGATCAGGGGACCGATGTCAACGCTCTACGGTTCTGATGCTATCGGTGGTGTTGTTAATATCATCACAAAAAAGATCACC
AAAGCGTGGGCCAGCTCAGCAACGCTTGAACACACCTTCCAGGAAAATACGGCTTTTGGTGACAGTTCAAAGTTCTCTTT
TTACTCCAGTGGGCCAGCGGTTGAAGATCAACTGGGGCTGTCGTTACGTGGCACGATTTTCCGGCGCGATGCCTCTCGCG
TTGAATCCTCCAATACGGGAGTAGAATTAAGCCGTCGTGGTCCCAATCCAGTAAAAGCAGACAACTATAATCTCGGTGGC
AAACTATTTTGGCAATTGAATACCCAAAGCACCTTGTGGTTGGATGGTGATATTGCTAACCAAAAATATGATAACAGTGC
CAACCAACTAGGTACCATTGGTGCACGAGGCGGTTACGAAGATACTCTGCGTTATCAACGCCGTAAAATAACCTTGGGCA
ACGATAATCGTTTGGACTTTGGTACCTGGAATTCGAGCTTATCTTATAACCAAACTGAAAATATTGGCCGCTTAATCACC
AATGCATCCGTGCCCCAAGGCTCTGGGTTGGCAGGTGAAAAACGTCTGTTGAAAAATACCAATATCATCCTTGATAGCAA
GCTGGTCGCCCCGCTGGGTGATAACCACATGGTGACCCTTGGCGGTCAATATTGGAATGCCATCATGAAAGACGGCATCG
TACTGGCAAATAATGGCGATGAGTTTGCACAAGATGCCTGGTCATTATTCAGCGAAGATGAATGGCGTCTGCTGGACTCA
CTGGCATTAACCTATGGCGCACGTTATGAATATCAAACTACGTTTGGCGGCCATATTAGCCCACGAGCCTATCTGGTGTG
GGACGCACAGGATAACTGGACGGTGAAAGGGGGTGTCAGCACGGGGTATAAAACCCCCACTCTAGCCCAGTTGCATAATG
GGATTAGCGGTGTCACAGGCCAAGGCACCATCACGACGATTGGTAACCCTAAGCTTGAACCAGAGAGTAGTGTCAACACC
GAGGTCGGTGTCTATTATGAAAACGAAACGGGATTTGGCGCTAATGTGACGCTGTTCCACAACCGCTTCAGGAACAAAAT
CAACAGCGTTTCGATTGATAATACCACCAGCACCTACACCAACGTCGGTAAAGCGATCACGTAG

Protein sequence :
MSNKTIAFALVVASSAPVIAADNDNIMVVTASGYEQKIREAAASISVISQNELRQRNYNDLAQALSDVEGVDVNSSTGKT
GGLDISIRGMPSAYTLILVDGIRQNGTSDVTPNGFGAMNTSFMPPLSAIERIEVIRGPMSTLYGSDAIGGVVNIITKKIT
KAWASSATLEHTFQENTAFGDSSKFSFYSSGPAVEDQLGLSLRGTIFRRDASRVESSNTGVELSRRGPNPVKADNYNLGG
KLFWQLNTQSTLWLDGDIANQKYDNSANQLGTIGARGGYEDTLRYQRRKITLGNDNRLDFGTWNSSLSYNQTENIGRLIT
NASVPQGSGLAGEKRLLKNTNIILDSKLVAPLGDNHMVTLGGQYWNAIMKDGIVLANNGDEFAQDAWSLFSEDEWRLLDS
LALTYGARYEYQTTFGGHISPRAYLVWDAQDNWTVKGGVSTGYKTPTLAQLHNGISGVTGQGTITTIGNPKLEPESSVNT
EVGVYYENETGFGANVTLFHNRFRNKINSVSIDNTTSTYTNVGKAIT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
r4 AAC61730.1 exogenous ferric siderophore receptor R4 Not tested PAI I CFT073 Protein 7e-129 58
iha AAF36432.2 adhesin Virulence TAI Protein 5e-130 58
Z1178 NP_286713.1 bifunctional enterobactin receptor/adhesin protein Virulence TAI Protein 7e-130 58
Z1617 NP_287121.1 bifunctional enterobactin receptor/adhesin protein Not tested TAI Protein 7e-130 58
c3610 NP_755485.1 bifunctional enterobactin receptor/adhesin protein Not tested PAI I CFT073 Protein 5e-130 58
ECUMN_3356 YP_002414032.1 bifunctional enterobactin receptor/adhesin protein Virulence Not named Protein 5e-130 58
unnamed CAC39288.1 hypothetical protein Not tested LPA Protein 1e-129 56

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
YPD4_2927 YP_005506136.1 hypothetical protein VFG1731 Protein 2e-130 58