Gene Information

Name : YPD4_1713 (YPD4_1713)
Accession : YP_005504924.1
Strain : Yersinia pestis D106004
Genome accession: NC_017154
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2208376 - 2209089 bp
Length : 714 bp
Strand : +
Note : -

DNA sequence :
ATGACCTCGTCAATCATAGGGATGAAACCTGAACATCTGGCTGATGCCGTTATTGAAACCCGACATTTGTATAAGCGCTT
TGGTCAAGTTACGGCACTGGAAGACATCAATATTCGTATTAACCGTGGTGAGTTTGTGGCGATTATGGGGGCATCAGGCT
CGGGAAAAACGACATTAATGAATATCCTGACTTGCCTGGATACGGTAAGTGAAGGCCAAGTATTACTCGACGGAATTGAT
GCCGCAGGTTTGGATGAAGAGGGCCGCCGACAATTTAGAGCCGATAAGATAGGGTTGGTCTTCCAGCAATTTCACCTTAT
TCCTTACCTTACTGCCTTAGAAAATATCATGTTGGCCCAGCATTATCACAGTGTGGTCGATGAAGAGGCCGCCAGACAAG
TATTGGAACAAGTGGGGATGACACCACGTATGGGCCATTTACCTAGCCAACTATCCGGTGGCGAACAGCAACGGGTATGT
ATTGCACGGGCGTTGGTGAATCAACCGCCGATCATTTTTGCCGATGAACCGACCGGCAACCTGGATGAAGAGAATGAACA
GCGAGTCTTGGAATTGCTAAACCATATCCATCGTCAAGGCCGTACTATTGTCATGGTGACCCATAATCCAGATTTAAGCT
GTGTTGCTGACCGGGTTATCCGGCTGCAACATGGTAAATATCTTGATGAAAAGAGCCGCCATCATGTGGCGTAA

Protein sequence :
MTSSIIGMKPEHLADAVIETRHLYKRFGQVTALEDINIRINRGEFVAIMGASGSGKTTLMNILTCLDTVSEGQVLLDGID
AAGLDEEGRRQFRADKIGLVFQQFHLIPYLTALENIMLAQHYHSVVDEEAARQVLEQVGMTPRMGHLPSQLSGGEQQRVC
IARALVNQPPIIFADEPTGNLDEENEQRVLELLNHIHRQGRTIVMVTHNPDLSCVADRVIRLQHGKYLDEKSRHHVA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-28 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-29 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-29 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-29 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
YPD4_1713 YP_005504924.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 2e-31 45
YPD4_1713 YP_005504924.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 2e-41 44
YPD4_1713 YP_005504924.1 ABC transporter ATP-binding protein NC_012469.1.7685735. Protein 2e-39 44
YPD4_1713 YP_005504924.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 1e-34 42