Gene Information

Name : YPD4_1517 (YPD4_1517)
Accession : YP_005504728.1
Strain : Yersinia pestis D106004
Genome accession: NC_017154
Putative virulence/resistance : Virulence
Product : fimbrial assembly chaperone protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1950460 - 1951146 bp
Length : 687 bp
Strand : +
Note : -

DNA sequence : 
GTGGCTCGTGCTGAAGTGATGATCAGTGGGACACGTGTTATTTATGAAGAGAAACAACGTGAGGGGGTGGTAAAGGTTTC
CAATACGGGCGATATGCCGGTCCTGCTTCAGGCCTGGATAGATAAAGGTGATGCGAACGCACGCCCAGAGGCTATCAAGG
TGCCGTTTAGTGTAACCCCCCCAGTAGTACGTTTAGACCCTAAAAGGGATCAGACTATTCGTCTTTTTCGCACTGATGGT
GGATTAGCGGCTGATCGTGAAACCCTATTTTGGTTTAACTTATTAGAAGTCCCGCCAAAGCCAATCCAAAGTGCGGCTGG
TGGTGAGAACAAAATGCAATTGGCTTTCCGTACCAGAATTAAAATGTTTTACCGCCCTGAAGGATTAACCGTATTACCTG
CGCAAGCGGCCAAGAGTCTCGCATTTTCAATGAAAGGCAATCAGATCGTCATAAAGAATGCCTCACCGTATTACATTACC
TTGAGAAAGCTAGAATTACGCACGTCAGAGAAAGGGCCTGTATTGGCTAATTTTACTAAAATCAATAATAAAATGGTTGC
CCCTTTTAGTGAACTAAGCTTACCTACGAGTGCAAAAGCATCGATCAATAATTCGGCACAAGTTTTTTATTCTGTTATTA
ATGATCAGGGCGGCGAAACTCAAGGTACGCAAAAACTGACCCAATAA

Protein sequence : 
MARAEVMISGTRVIYEEKQREGVVKVSNTGDMPVLLQAWIDKGDANARPEAIKVPFSVTPPVVRLDPKRDQTIRLFRTDG
GLAADRETLFWFNLLEVPPKPIQSAAGGENKMQLAFRTRIKMFYRPEGLTVLPAQAAKSLAFSMKGNQIVIKNASPYYIT
LRKLELRTSEKGPVLANFTKINNKMVAPFSELSLPTSAKASINNSAQVFYSVINDQGGETQGTQKLTQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ecpD1 AAO49832.1 pilin chaperone ecpD1 Not tested SPI-3 Protein 8e-45 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
YPD4_1517 YP_005504728.1 fimbrial assembly chaperone protein VFG0007 Protein 1e-38 43
YPD4_1517 YP_005504728.1 fimbrial assembly chaperone protein VFG1145 Protein 1e-33 42