Gene Information

Name : YPD4_1473 (YPD4_1473)
Accession : YP_005504684.1
Strain : Yersinia pestis D106004
Genome accession: NC_017154
Putative virulence/resistance : Resistance
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1897490 - 1899127 bp
Length : 1638 bp
Strand : -
Note : -

DNA sequence :
ATGAACGCTCGATATAAATTACAGTGTAACGGATTAACATTTATTCTGGCCTGTGCACTGTTTTTTACCTTCTTCCAAAA
TGCACTGTTTATTTATAAAGCCTGGTCGTTGATCCGATTCGACAATAGCGACAGCTATTTTTTTGCAGCAACCATTCCAG
TCGTGATTTTCTGTGCACTGAATATTATTTTTAGCTTATTAACTCTCCCTCTGTTACGTAAGCCTATTATTATTTTATTC
CTGTTGGGAAGTGCGGTGGCTAACTACTTTATGTTCAGCTATGGTGCTGTTATCGATGCCAATATGATGCAGAATGCCTT
TGAAACTAACTCACAGGAAGCCACCGCCCTTTTCACTCCTCGTATGGCATTGTGGCTAATAACATTAGGTATTTTGCCTG
CCATGATTGTCTGCTTTGTGCGAATTCGAGCGACTCGCCCTTGGTGGTATATGCTGGGGTTACGGGTAGCAAATATTTTA
ATGTCAATGGTAATAATTTTTCTTATCGCAGTCTTGTTCTATAAAGATTATGCGTCGCTGATCCGCAATAATAAAAATAT
CGTCAAAATGCTGACACCATCAAATTTTGTTAGCGGCAGTTTTCAATTTGCCAAACACAAGTATTTTATCAGTAACATGC
CATTGGTAAAAATAGGTGAAGACGCCCATAAGGGCCCAGTGATTAATGCACAACAAAATAAAACGCTGGTGATTTTGGTG
GTGGGTGAAACCGCCCGGTCAGAAAACTTTTCATTGGGCGGATATGCTCGGGAAACGAACCCTCGCCTGCAACAACAAGA
TATCATTTATTTCAAACATGCCTCATCCTGTGGCACTGAAACGGCGGTCTCTGTCCCCTGTATGTTCTCTAATATGCCAC
GCAAAAGTTATGACGCCTCCCTGGCGAGTCATCAGGAAGGGTTAATGGATATTATTGCGCGCGCTGGATTGAGTGTATTG
TGGCGTGAAAATGATGGTGGCTGTAAAGGCGCTTGTGACCGTATTCCACACCAGGATGTGACGCAATTGCAACTTAACGC
AGATTGTCAGGATGGGGTATGTTTAGATAATGCGCTTTTATATAAACTGGATAACTATATTAATGGATTACAGAATGACG
GTGTAATCGTCTTACACCAAATGGGCAGCCACGGGCCCGCATACTATCGCCGTACCAGCCCGGAGTTGACTAAATTCACC
CCGACGTGTAATAGCAACCAGATTCAGGACTGCACCGCCCAAGAACTGGTCAATACATACGATAACTCTATTCTCTATAC
TGATGCCATGCTGGATGACACCATTGCCTTGTTGAAACAGCACAGTGACCGATTTAATACGGCGTTGGTCTATCTTTCAG
ACCATGGTGAATCACTCGGTGAAAACGGCCTCTATTTACATGGTACACCTTATGTATTTGCCCCAAGCCAGCAAACTCAT
ATCCCTTTTCTGATGTGGTTATCACCAGAATATACAAAAAGCTATGGTATTGACCGTCAATGCTTATCACATAGCGCACA
ACAGGATGAAGTGTCTCAGGATAATCTCTTCCATACCCTATTAGGGATGGTAAACATTCAGACCAACGAATACTTATCAG
GCATGGATTTACTGCAAAAATGCCGGAGTCTGCAATAG

Protein sequence :
MNARYKLQCNGLTFILACALFFTFFQNALFIYKAWSLIRFDNSDSYFFAATIPVVIFCALNIIFSLLTLPLLRKPIIILF
LLGSAVANYFMFSYGAVIDANMMQNAFETNSQEATALFTPRMALWLITLGILPAMIVCFVRIRATRPWWYMLGLRVANIL
MSMVIIFLIAVLFYKDYASLIRNNKNIVKMLTPSNFVSGSFQFAKHKYFISNMPLVKIGEDAHKGPVINAQQNKTLVILV
VGETARSENFSLGGYARETNPRLQQQDIIYFKHASSCGTETAVSVPCMFSNMPRKSYDASLASHQEGLMDIIARAGLSVL
WRENDGGCKGACDRIPHQDVTQLQLNADCQDGVCLDNALLYKLDNYINGLQNDGVIVLHQMGSHGPAYYRRTSPELTKFT
PTCNSNQIQDCTAQELVNTYDNSILYTDAMLDDTIALLKQHSDRFNTALVYLSDHGESLGENGLYLHGTPYVFAPSQQTH
IPFLMWLSPEYTKSYGIDRQCLSHSAQQDEVSQDNLFHTLLGMVNIQTNEYLSGMDLLQKCRSLQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z1140 NP_286675.1 hypothetical protein Not tested TAI Protein 2e-99 43
Z1579 NP_287083.1 hypothetical protein Not tested TAI Protein 2e-99 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
YPD4_1473 YP_005504684.1 hypothetical protein BAC0485 Protein 6e-142 53