|
Name : sepC (YPD4_1470) Accession : YP_005504681.1 Strain : Yersinia pestis D106004 Genome accession: NC_017154 Putative virulence/resistance : Virulence Product : insecticidal toxin Function : - COG functional category : - COG ID : - EC number : - Position : 1892308 - 1895262 bp Length : 2955 bp Strand : + Note : - DNA sequence : ATGAACACATCACTATTCAGTAAAACCCCGGCGGTCACGGTCCTCGACAACCGTGGGCTGTCCGTGCGCAGCATCGCGTA CCATCGCCATCCCGACTCGCCGGATGACACTGGTGAGCGTATCACCCATCACCAGTATGATGCCCGTGGTTTCCTCACGC AAAGCGCCGATCCCCGCCTGCACGACACTGGTCGGGCGAACGTCAAGTACCTGTCGGACCTGGTCGGAAACGCCCTGTGT ACCGTCAGCGCCGATGTTGGTACCACTGTAGCTCTGAACGATGCCGCCGGTCGGCTATTTATGACAGTCAGTAATATTGA CACCGCTGACGACGATCTGGAGGACAGAAGCCAGGTGGTGAACCGTACCTGGCAGTATGAGGGTGCCTCACTGCCGGGAC GCCTGCTGAGCATTACAGAGCAGGTCACTGGTGAAGCCGCCCGCGTCACCGAGCGTTTTACGTATGCCGCCAACACGGAC GAGAAAAAAGCCCTGAACCTGGTCGGACAGTGCGTCAGCCACTACGACACAGCAGGTCTGAGGCAGATGGACAGTATTGC CCTGACCGGTGTGCCACTCTCCGTCACCCGCCGCTTGCTGAAGGATGCGGACAACCCGGATACCGTGGCAAACTGGCAGG GTGAGGACAGCTCCGCCTGGAATGACCAGTTGGCAGCAGACAGGCTAACCACTCTGACGACTGCGGACGCTATCGGCGCG GTGCTAACCACCACCGATACAAAAGGCAACGTGCAGCGGGTGGTGTACAACGTGGCAGGCCTGCTGTCGGGCAGTTGGCT GAGGGTGAAAGGCGGCGCGGAGCAGGTTATCGTTCAATCGTTGACGTACTCGGCAGCCGGGCAGAAGCTGCGCGAGGAGC ACGGTAACGGCGTGGTGACCACGTACACATACGAGCCGGAGACGCAACGCCTGACCGGCATCCGGACGGAGCGGTCAGCC GGACATGCATCCGGAACGAAGGTGCTTCAGGACTTGCGCTATGAGTATGATCCCGTGGGCAACGTGCAGAGCATCAGAAA CGACGCAGAAGAAACCCGCTTCTGGCGCAACCAGAAAGTGGTGCCGGAGAATACGTATGTCTACGACAGCTTGTACCAGT TGGTCAGCGCCACCGGGCGCGTGATGGTGAACGCCGGACAGCAGGGCCGCAGCCTGCCTTCCGCCACCCTTCCTATAGAG AGTTCCGCATATACAAACTACACCCACACCTATACCTACGATACCGCGGGTAACCTGACGCAGATCCGACACACCCCGGC AACCGGCAGTGGTCACACAACGGATATCACGGTCAGCGACCGCAGCAACCAGGGCGTGCTGAGCACACTGACCACAAATC CGGCAGAGGTTGACGCTCTGTTCACGGCAGGCGGCCAGCAGAAACAGCTACAGCCAGGACAGCATCTTATCTGGACAGCG CGTAACGAGCTGCTGAAGGTGACGCCGGTGGTACGGGACGGAGACAGCGATGACAGGGAAAGCTACCGTTATGACGGAAA CAGCCAGCGCATCCTGAAGGTCAGCGTGCAGAAAACGGGAGGCAGCACGCAGACGCAGCGGGTTATGTACCTGCCGAGGC TGGAACTGCGTAGCACAGCCAGCGGCGTGACAGAAACGGAAAGCCTGCAGATTATCACTGTCGGTGAGGCGGGCCGGGCG CAGGTGCAGGTGCAGGTGCTGCATTGGGAAAAGGGCAAGCCGGACGCTATCGATAATGACCAACTGCGCTACAGCTATGA CAACTTGATCGGCAGCAGTACGCTTGAGGTGGATGGGGATGGCAATGTTATCAGCATGGAGGAATACTACCCGTACGGCG GCACGGCGGTGTGGACAGCGCACAGCCAGACGGAAGCAGACTACAAAACGATCAGATACTCAGGGAAGGAACGCGATGCG ACGGGGTTGTACTACTATGGCTGGCGTTATTACCAACCTTGGGTGGGGCGCTGGCTCTCCGCAGATCCGGTGGGAACAGT GGACGGACTGAACCTGTATTTGATGGTAGGAAATAACCCAACATCCTTCCATGACAGTAATGGCTTAATACGTGAAGGAC AGAGTGCAAGGAAATTAGTGGGGGAAGCCTTTGTGCATCCTTTACATATGTCGGTGTTTGAACGCATATCCATTGAAGAG AATATGGCAATGAGCGTAAGGGAAGCGGGTATTTATACTATTTTAGCACTGGGTGAAGGTGCAGCAGCAAAAGGCCATAA TATTCTTGAGAAAACAATTAAACCCGGATCCCTGAAGGCTGTCTATGAGAATAAGGCCGGAGCTGCTCTTGAACTGGCAA AAAATAGTGGTTTTATTGGCCGGGTTGGCCGGTGGAATGCGTCTGGTGTGCAGGGGGTTTATGCGTACAACAGACCAAGC GGGGAGGATTTGGTTTATCCTGCCAGCCTGCAGGATACTTCTGATAATGAATTAGTGAATGCATGGATAAAACATAAGAT AATCACGCCTTATACTGGGGATTATGACATGCACGATATTATTAAATTCAATCGTGGAAAAGGGTATGTGCCCACCGCGG AAAGCGCTGAGGAAACAGGAGTAAAAGACCTAATTAATAAAGGCGTTGCAGAAGTCGATCCCGCCCGGCCTTTTGAGTAT ACAGCGATGAATGTCATTCGCCATGGGCCTCAGGTAAACTTTGTTCCTTACATGTGGGAATATGAACACGATAAAGTTGT TAGCGATAATGGCTATCTGGGGGTAGTTGCGCGTCCAGGTCCATTCCCGATAGCAATGGTACATCAGGGGCAATGGACTG TTTTTGACGACAGTAAAGAGCTGTTTAACTTTTACAAATCGAGTAATACTCCGCTACCAGAACACTGGCAACAGAATTTT ATTGCAAGAGGCCCTGGTATAGTTGCAACTCCGCGGCATGCTGACGTTCTTGATAAACGACGAATCATGCATTAA Protein sequence : MNTSLFSKTPAVTVLDNRGLSVRSIAYHRHPDSPDDTGERITHHQYDARGFLTQSADPRLHDTGRANVKYLSDLVGNALC TVSADVGTTVALNDAAGRLFMTVSNIDTADDDLEDRSQVVNRTWQYEGASLPGRLLSITEQVTGEAARVTERFTYAANTD EKKALNLVGQCVSHYDTAGLRQMDSIALTGVPLSVTRRLLKDADNPDTVANWQGEDSSAWNDQLAADRLTTLTTADAIGA VLTTTDTKGNVQRVVYNVAGLLSGSWLRVKGGAEQVIVQSLTYSAAGQKLREEHGNGVVTTYTYEPETQRLTGIRTERSA GHASGTKVLQDLRYEYDPVGNVQSIRNDAEETRFWRNQKVVPENTYVYDSLYQLVSATGRVMVNAGQQGRSLPSATLPIE SSAYTNYTHTYTYDTAGNLTQIRHTPATGSGHTTDITVSDRSNQGVLSTLTTNPAEVDALFTAGGQQKQLQPGQHLIWTA RNELLKVTPVVRDGDSDDRESYRYDGNSQRILKVSVQKTGGSTQTQRVMYLPRLELRSTASGVTETESLQIITVGEAGRA QVQVQVLHWEKGKPDAIDNDQLRYSYDNLIGSSTLEVDGDGNVISMEEYYPYGGTAVWTAHSQTEADYKTIRYSGKERDA TGLYYYGWRYYQPWVGRWLSADPVGTVDGLNLYLMVGNNPTSFHDSNGLIREGQSARKLVGEAFVHPLHMSVFERISIEE NMAMSVREAGIYTILALGEGAAAKGHNILEKTIKPGSLKAVYENKAGAALELAKNSGFIGRVGRWNASGVQGVYAYNRPS GEDLVYPASLQDTSDNELVNAWIKHKIITPYTGDYDMHDIIKFNRGKGYVPTAESAEETGVKDLINKGVAEVDPARPFEY TAMNVIRHGPQVNFVPYMWEYEHDKVVSDNGYLGVVARPGPFPIAMVHQGQWTVFDDSKELFNFYKSSNTPLPEHWQQNF IARGPGIVATPRHADVLDKRRIMH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| TccC3 | AAO17204.1 | TccC3 | Virulence | tcd island | Protein | 0.0 | 61 |
| TccC4 | AAO17196.1 | TccC4 | Virulence | tcd island | Protein | 8e-171 | 59 |
| TccC5 | AAO17210.1 | TccC5 | Virulence | tcd island | Protein | 2e-169 | 56 |
| tccC | CAI77380.1 | putative insecticidal toxin complex protein | Not tested | tc-PAIYe | Protein | 4e-135 | 50 |
