Gene Information

Name : yscT (YPD4_pCD0032)
Accession : YP_005503178.1
Strain :
Genome accession: NC_017153
Putative virulence/resistance : Virulence
Product : needle complex export protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 31209 - 31994 bp
Length : 786 bp
Strand : +
Note : -

DNA sequence : 
ATGATAGCGGATTTAATCCAAAGACCATTGCTCACTTATACCCTGCTGTTGCCTCGTTTTATGGCTTGTTTTGTTATATT
GCCAGTGTTAAGTAAACAGCTCCTCGGTGGAGTATTGCTGCGTAATGGTATTGTCTGTTCATTGGCTCTTTATGTCTATC
CTGCCGTCGCTAACCAACCTTATATTGAGGTTGATGCGTTTACGTTGATGCTGCTTATCGGCAAAGAGATCATACTGGGG
TTATTGATTGGGTTTGTGGCCACCATTCCTTTCTGGGCCTTAGAATCCGCAGGATTTATTGTAGATAACCAAAGAGGTGC
CGCGATGGCATCTCTACTCAATCCTGGACTTGATAGTCAAACTAGTCCGACTGGTTTACTTTTGACTCAAACGTTAATAA
CAATTTTCTTCAGCGGAGGGGCTTTCCTCTCTTTGCTTTCAGCCCTCTTTCACAGCTATGTAAATTGGCCGGTGGCCAGC
TTTTTCCCTGCAGTTAGTGAACAGTGGGTTGATTTCTTTTATAACCAATTCAGCCAGATACTATTAATCGCCGCTGTATT
GGCTGCTCCTTTACTCATCGCTATGTTTTTAGCTGAATTTGGACTTGCACTCATCAGTCGTTTTGCGCCTTCTTTAAACG
TCTTTGTGCTGGCTATGCCGATAAAAAGCGCGATAGCAAGCCTGTTGTTGGTTATCTACTGTATGCAAATGATGAGTCAT
GCCAGTAAAGCAATGCTGTTGGTTATGGATCCTATAAGTTTACTGATCCCTGTTTTGGAGAAGTAA

Protein sequence : 
MIADLIQRPLLTYTLLLPRFMACFVILPVLSKQLLGGVLLRNGIVCSLALYVYPAVANQPYIEVDAFTLMLLIGKEIILG
LLIGFVATIPFWALESAGFIVDNQRGAAMASLLNPGLDSQTSPTGLLLTQTLITIFFSGGAFLSLLSALFHSYVNWPVAS
FFPAVSEQWVDFFYNQFSQILLIAAVLAAPLLIAMFLAEFGLALISRFAPSLNVFVLAMPIKSAIASLLLVIYCMQMMSH
ASKAMLLVMDPISLLIPVLEK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lscT AAO18038.1 LscT Virulence TTSS locus Protein 1e-50 71

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
yscT YP_005503178.1 needle complex export protein VFG0396 Protein 5e-76 100
yscT YP_005503178.1 needle complex export protein VFG0186 Protein 6e-44 69