|
Name : smpB (APA42C_11850) Accession : YP_005501692.1 Strain : Acetobacter pasteurianus IFO 3283 Genome accession: NC_017150 Putative virulence/resistance : Unknown Product : trans-translation helper factor SmpB Function : - COG functional category : - COG ID : - EC number : - Position : 1244096 - 1244602 bp Length : 507 bp Strand : - Note : SsrA-binding protein, transfer-messenger RNA (tmRNA)-binding protein DNA sequence : ATGAGCTCCAAATCTGGAAAATCTGCCAAAAGCTCCATGATCTCTCATGGCATGGTGGCGCAAAACCGTAAGGCGCGCTT CAATTACAATATTCTGGAAACCATTGAGGCCGGGCTCGTACTAAAGGGCGCTGAAGTAAAAAGCCTGCGCCTTGGCCGTG CCACCATTAACGAAGCCTTTGCTGGTGAACGCGATGGAGCGCTCTGGCTGTTCAACAGCTATATTCCCGAATACCAGGGG GGCGTTCTTTCTCGCTTTGATACGCGCGCCCCGCGCAAGCTGCTGATGCACCGCAAGGAAATGCGCAAGTTTATAGGTGC CATTGCCAAGCAGGGCGCAACACTTGTGCCCTTGAATGTGCATTTTAATGATAGAGGCTTAGCTAAAGTCACGCTCGGCT TGGGCGTCGGTAAGAAAAGTCATGACAAGCGCCAGAGCATTGCAGACAGAGATTGGCAGCGTGACAAAGCGCGCCTAATT CGGAACAAGGGGAAGGGAGACTACTAA Protein sequence : MSSKSGKSAKSSMISHGMVAQNRKARFNYNILETIEAGLVLKGAEVKSLRLGRATINEAFAGERDGALWLFNSYIPEYQG GVLSRFDTRAPRKLLMHRKEMRKFIGAIAKQGATLVPLNVHFNDRGLAKVTLGLGVGKKSHDKRQSIADRDWQRDKARLI RNKGKGDY |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| smpB | YP_001800894.1 | SsrA-binding protein | Not tested | Not named | Protein | 9e-22 | 44 |
| unnamed | AET14351.1 | SsrA-binding protein | Not tested | SaPI68111 | Protein | 1e-20 | 41 |
