Gene Information

Name : resD (BMWSH_0863)
Accession : YP_005493056.1
Strain : Bacillus megaterium WSH-002
Genome accession: NC_017138
Putative virulence/resistance : Virulence
Product : Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 880402 - 881118 bp
Length : 717 bp
Strand : +
Note : -

DNA sequence :
ATGCAAAACGAACAAAGATTACTGCTAGTAGACGATGAAGATCGCATTAGACGATTGTTAAAAATGTACTTAGAAAAAGA
AGGATACATCATTGAAGAAGCAGCCGATGGGCATGAAGCAATCGAAAAAGCGTTACACATAGATTATGATTTGATTGTAT
TAGATTTAATGATGCCTGGCATAGACGGTATTGAGGTTTGTAAACAAATTCGGGAGAAAAAAGCAACTCCTATTATCATG
CTTACAGCTAAAGGGGAAGAAGTAAACAGAGTCCAAGGGTTTGAAGTAGGTACAGATGATTATATCGTTAAGCCGTTTAG
CCCAAGAGAAGTGGTTCTTCGCGTAAAAGCACTGCTTCGACGTTCTTCTCAAGCAACGTTTATTCAACCAGAAACGAGCG
TGAAAAATCTTATTGTCTTTGATCACTTAACGATTGATAATGACGCACATCGCGTTACAGCAGACGGAAAAGAAGTTAAC
TTAACTCCAAAAGAATATGAATTATTATGCTACCTTGCAAAAACGCCAGATAAAGTATATGACAGAGAACAGCTGCTGCG
TGAAGTATGGCATTATGATTTCTTTGGAGATCTTCGTACGGTAGATACACACGTCAAGCGTTTGCGTGAAAAGTTAAACC
GCGTATCGTCACAAGCGGCGAAAATGATTGTAACCGTTTGGGGAGTAGGGTATAAATTTGAGGTTGAAAATAACTGA

Protein sequence :
MQNEQRLLLVDDEDRIRRLLKMYLEKEGYIIEEAADGHEAIEKALHIDYDLIVLDLMMPGIDGIEVCKQIREKKATPIIM
LTAKGEEVNRVQGFEVGTDDYIVKPFSPREVVLRVKALLRRSSQATFIQPETSVKNLIVFDHLTIDNDAHRVTADGKEVN
LTPKEYELLCYLAKTPDKVYDREQLLREVWHYDFFGDLRTVDTHVKRLREKLNRVSSQAAKMIVTVWGVGYKFEVENN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 1e-39 41
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 4e-39 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
resD YP_005493056.1 Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain protein NC_003923.1003749.p0 Protein 6e-45 49
resD YP_005493056.1 Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain protein NC_002952.2859905.p0 Protein 4e-45 48
resD YP_005493056.1 Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain protein NC_002758.1121668.p0 Protein 6e-45 48
resD YP_005493056.1 Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain protein NC_007622.3794472.p0 Protein 4e-45 48
resD YP_005493056.1 Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain protein NC_009641.5332272.p0 Protein 6e-45 48
resD YP_005493056.1 Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain protein NC_013450.8614421.p0 Protein 6e-45 48
resD YP_005493056.1 Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain protein NC_007793.3914279.p0 Protein 6e-45 48
resD YP_005493056.1 Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain protein NC_002745.1124361.p0 Protein 6e-45 48
resD YP_005493056.1 Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain protein NC_009782.5559369.p0 Protein 6e-45 48
resD YP_005493056.1 Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain protein NC_002951.3237708.p0 Protein 6e-45 48
resD YP_005493056.1 Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain protein HE999704.1.gene2815. Protein 1e-45 48
resD YP_005493056.1 Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain protein NC_012469.1.7685629. Protein 3e-42 47
resD YP_005493056.1 Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain protein AE016830.1.gene1681. Protein 8e-47 45
resD YP_005493056.1 Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain protein AF155139.2.orf0.gene Protein 6e-44 44
resD YP_005493056.1 Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain protein NC_013450.8614146.p0 Protein 1e-42 43
resD YP_005493056.1 Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain protein NC_002951.3238224.p0 Protein 1e-42 43
resD YP_005493056.1 Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain protein NC_007793.3914065.p0 Protein 1e-42 43
resD YP_005493056.1 Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain protein NC_002758.1121390.p0 Protein 1e-42 43
resD YP_005493056.1 Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain protein NC_010079.5776364.p0 Protein 1e-42 43
resD YP_005493056.1 Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain protein NC_002952.2859858.p0 Protein 1e-42 43
resD YP_005493056.1 Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain protein NC_007622.3794948.p0 Protein 1e-42 43
resD YP_005493056.1 Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain protein NC_003923.1003417.p0 Protein 1e-42 43
resD YP_005493056.1 Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain protein CP004022.1.gene1676. Protein 2e-37 43
resD YP_005493056.1 Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain protein NC_012469.1.7686381. Protein 8e-42 43
resD YP_005493056.1 Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain protein FJ349556.1.orf0.gene Protein 5e-43 43
resD YP_005493056.1 Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain protein AE015929.1.gene1106. Protein 7e-37 42
resD YP_005493056.1 Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain protein AM180355.1.gene1830. Protein 6e-39 42
resD YP_005493056.1 Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain protein AF130997.1.orf0.gene Protein 6e-37 41
resD YP_005493056.1 Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain protein DQ212986.1.gene4.p01 Protein 2e-38 41
resD YP_005493056.1 Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain protein NC_002695.1.916589.p Protein 5e-37 41
resD YP_005493056.1 Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain protein BAC0596 Protein 4e-36 41
resD YP_005493056.1 Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain protein BAC0039 Protein 6e-37 41
resD YP_005493056.1 Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain protein CP001138.1.gene2239. Protein 4e-36 41
resD YP_005493056.1 Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain protein CP000034.1.gene2186. Protein 6e-37 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
resD YP_005493056.1 Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain protein VFG1563 Protein 8e-40 41
resD YP_005493056.1 Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain protein VFG1702 Protein 2e-39 41