Gene Information

Name : lysS (BMWSH_5131)
Accession : YP_005497318.1
Strain : Bacillus megaterium WSH-002
Genome accession: NC_017138
Putative virulence/resistance : Virulence
Product : lysyl-tRNA synthetase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4920715 - 4922199 bp
Length : 1485 bp
Strand : -
Note : -

DNA sequence :
ATGAGTCATGAAGAATTAAATGATCAATTTCTCGTTCGTCGCGAAAAAATGAGCAACCTACGAGATCAAGGTATTGATCC
GTTTGGTCAACGTTTTGAACGTACACATACATCACAGCAATTAATTAGTGAGTATGACGAGTTAACAAAAGAACAGTTAG
AAGAAAATGAAGTGCCTGTGTCACTAGCTGGTCGTATTATGACAAAGCGTGGAAAAGGAAAAGCAGGTTTCGCTCACGTT
CAAGATTTAACAGGACAAATTCAGCTTTATGTACGTAAAGATGCAATTGGCGAAGAACAGTACGAAATCTTCAGCAGCGT
AGATATCGGTGACTTGGTAGGCGTTGAAGGTGTTTTATTCAAAACAAAAGTTGGCGAACTTTCTATTAAAGTAAAAGATT
TCACGTTACTAACAAAAGCGCTTCGTCCACTTCCAGATAAATATCATGGTTTAAAAGATATTGAACAGCGCTACCGTCAA
CGTTACTTAGATTTAATTACAAACCCAGAAAGTAAACAAACATTTATCTCAAGAAGCCGCATTATTCAATCGATGCGCCG
TTACTTAGATAATCATGGATACTTAGAAGTTGAAACACCGATGATGCATTCAATCGCAGGTGGAGCAGCAGCTCGTCCGT
TTGTGACACACCACAATGCGCTTGATATGGAACTTTATATGCGTATTGCGATTGAACTTCATTTAAAACGTTTAATCGTA
GGTGGATTAGAAAAAGTATATGAAATTGGCCGTGTATTCCGTAATGAAGGTGTGTCTACACGTCACAACCCTGAATTTAC
AATGATCGAATTGTACGAAGCGTATGCGGACTACAAAGATATCATGGCTTTAACAGAGAACTTAATTGCACATATTGCGC
AAGAAGTACTTGGCACAACAAAGATTCAGTATGGCGATCAAGAGGTGGATTTAACTCCAGAGTGGACAAGACTTCATATG
GTCGATGCTATTAAACAATATACGGGCGTAGACTTCTGGGGAGAAACATCTGTTGAAGAAGCTCGTGCTTTAGCGAAAGA
ACACGGGGTAGAAATCACTGAACACATGCAATATGGACATATTGTAAATGAATTCTTTGAACAAAAAGTAGAAGAGCAGT
TAATTCAACCAACGTTCATTTACGGACATCCTGTAGAGATCTCTCCACTTGCTAAGAAAAATGCGGAAGATCCGCGTTTT
ACTGACCGTTTTGAGCTGTTTATCGTTGCACGTGAACACGCGAACGCATTTACAGAGCTAAATGATCCAATTGACCAACG
TGAGCGCTTTGAAGCTCAGTTGAAAGAGAAAGAACAAGGAAACGATGAAGCACATGAGATGGATGATGACTTCATTGAGG
CATTAGAATATGGTATGCCACCTACAGGTGGTCTAGGAATCGGTATTGACCGCCTTGTTATGTTACTAACAAATGCACCG
TCAATCCGTGATGTACTATTATTCCCACATATGCGTCAACGCTAA

Protein sequence :
MSHEELNDQFLVRREKMSNLRDQGIDPFGQRFERTHTSQQLISEYDELTKEQLEENEVPVSLAGRIMTKRGKGKAGFAHV
QDLTGQIQLYVRKDAIGEEQYEIFSSVDIGDLVGVEGVLFKTKVGELSIKVKDFTLLTKALRPLPDKYHGLKDIEQRYRQ
RYLDLITNPESKQTFISRSRIIQSMRRYLDNHGYLEVETPMMHSIAGGAAARPFVTHHNALDMELYMRIAIELHLKRLIV
GGLEKVYEIGRVFRNEGVSTRHNPEFTMIELYEAYADYKDIMALTENLIAHIAQEVLGTTKIQYGDQEVDLTPEWTRLHM
VDAIKQYTGVDFWGETSVEEARALAKEHGVEITEHMQYGHIVNEFFEQKVEEQLIQPTFIYGHPVEISPLAKKNAEDPRF
TDRFELFIVAREHANAFTELNDPIDQRERFEAQLKEKEQGNDEAHEMDDDFIEALEYGMPPTGGLGIGIDRLVMLLTNAP
SIRDVLLFPHMRQR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD66193.1 putative lysil-tRNA synthetase LysU Not tested PAI III 536 Protein 1e-122 51

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
lysS YP_005497318.1 lysyl-tRNA synthetase VFG1668 Protein 8e-123 51