Gene Information

Name : phoP (BMWSH_0485)
Accession : YP_005492678.1
Strain : Bacillus megaterium WSH-002
Genome accession: NC_017138
Putative virulence/resistance : Resistance
Product : alkaline phosphatase synthesis transcriptional regulatory protein phoP
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 500972 - 501709 bp
Length : 738 bp
Strand : +
Note : -

DNA sequence :
ATGGAGGCTTATATCGTTAATATGAGTAAGAAATTATTAGTCGTAGATGATGAACAATCAATTTCAACATTATTACAATA
TAATTTACAACAAGCTGGCTTTACAGTAGAAACAGCTGAAGACGGGGAAGAAGGATACAACAAGGCACTAGAAGGAAAAC
CGGATTTAATTGTGTTAGACTTGATGCTTCCTAAGATGGATGGAATTGAAGTTTGTAAAAAGCTTCGTCAGCAAAAAGTG
ATGACGCCTATTTTAATGTTAACTGCAAAAGACGATGAGTTCGACAAAGTATTAGGGCTAGAGCTTGGGGCAGATGATTA
CATGACGAAACCATTTAGCCCTCGAGAAGTAGTAGCGCGTGTAAAAGCCATTTTACGCAGAACACAAATTATTGCTCAGG
AAAATGAACAAGAGGAAGATGGCGAACGCATCATGATTGGTGATTTAAAAATTCTTCCAGATCATTATGAGGCCTACTTT
AATCAAGAGCAGCTTGAGCTTACTCCGAAAGAATTCGAGTTATTATTATATTTGGCAAAATACAAAGGACGGGTATTAAC
TCGTGATCAGTTGCTAAGTGCAGTGTGGAATTATGATTTTGCCGGAGATACGCGAATTGTAGATGTGCACATCAGCCATT
TGCGTGAGAAAATTGAACATAACACGCGAAAACCTGTTTATATAAAAACGATTAGAGGATTAGGATATAAGCTGGAGGAA
CCAAAGGTAGATGAATAA

Protein sequence :
MEAYIVNMSKKLLVVDDEQSISTLLQYNLQQAGFTVETAEDGEEGYNKALEGKPDLIVLDLMLPKMDGIEVCKKLRQQKV
MTPILMLTAKDDEFDKVLGLELGADDYMTKPFSPREVVARVKAILRRTQIIAQENEQEEDGERIMIGDLKILPDHYEAYF
NQEQLELTPKEFELLLYLAKYKGRVLTRDQLLSAVWNYDFAGDTRIVDVHISHLREKIEHNTRKPVYIKTIRGLGYKLEE
PKVDE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
vanRB YP_008394254.1 DNA-binding response regulator VanRB Not tested Not named Protein 3e-39 42
vanRB NP_815956.1 DNA-binding response regulator VanRB Not tested Not named Protein 1e-37 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
phoP YP_005492678.1 alkaline phosphatase synthesis transcriptional regulatory protein phoP HE999704.1.gene2815. Protein 1e-78 70
phoP YP_005492678.1 alkaline phosphatase synthesis transcriptional regulatory protein phoP NC_002952.2859905.p0 Protein 8e-75 66
phoP YP_005492678.1 alkaline phosphatase synthesis transcriptional regulatory protein phoP NC_002951.3237708.p0 Protein 1e-74 66
phoP YP_005492678.1 alkaline phosphatase synthesis transcriptional regulatory protein phoP NC_003923.1003749.p0 Protein 1e-74 66
phoP YP_005492678.1 alkaline phosphatase synthesis transcriptional regulatory protein phoP NC_002758.1121668.p0 Protein 1e-74 66
phoP YP_005492678.1 alkaline phosphatase synthesis transcriptional regulatory protein phoP NC_007622.3794472.p0 Protein 7e-75 66
phoP YP_005492678.1 alkaline phosphatase synthesis transcriptional regulatory protein phoP NC_009641.5332272.p0 Protein 1e-74 66
phoP YP_005492678.1 alkaline phosphatase synthesis transcriptional regulatory protein phoP NC_013450.8614421.p0 Protein 1e-74 66
phoP YP_005492678.1 alkaline phosphatase synthesis transcriptional regulatory protein phoP NC_007793.3914279.p0 Protein 1e-74 66
phoP YP_005492678.1 alkaline phosphatase synthesis transcriptional regulatory protein phoP NC_002745.1124361.p0 Protein 1e-74 66
phoP YP_005492678.1 alkaline phosphatase synthesis transcriptional regulatory protein phoP NC_009782.5559369.p0 Protein 1e-74 66
phoP YP_005492678.1 alkaline phosphatase synthesis transcriptional regulatory protein phoP AE016830.1.gene1681. Protein 7e-66 56
phoP YP_005492678.1 alkaline phosphatase synthesis transcriptional regulatory protein phoP NC_012469.1.7686381. Protein 4e-60 53
phoP YP_005492678.1 alkaline phosphatase synthesis transcriptional regulatory protein phoP NC_012469.1.7685629. Protein 6e-54 53
phoP YP_005492678.1 alkaline phosphatase synthesis transcriptional regulatory protein phoP AE000516.2.gene3505. Protein 1e-41 44
phoP YP_005492678.1 alkaline phosphatase synthesis transcriptional regulatory protein phoP CP001485.1.gene721.p Protein 1e-35 44
phoP YP_005492678.1 alkaline phosphatase synthesis transcriptional regulatory protein phoP CP004022.1.gene3215. Protein 8e-40 44
phoP YP_005492678.1 alkaline phosphatase synthesis transcriptional regulatory protein phoP CP001918.1.gene5135. Protein 6e-32 44
phoP YP_005492678.1 alkaline phosphatase synthesis transcriptional regulatory protein phoP NC_014475.1.orf0.gen Protein 3e-40 43
phoP YP_005492678.1 alkaline phosphatase synthesis transcriptional regulatory protein phoP NC_005054.2598277.p0 Protein 3e-40 43
phoP YP_005492678.1 alkaline phosphatase synthesis transcriptional regulatory protein phoP AF162694.1.orf4.gene Protein 4e-36 43
phoP YP_005492678.1 alkaline phosphatase synthesis transcriptional regulatory protein phoP AF310956.2.orf0.gene Protein 2e-39 42
phoP YP_005492678.1 alkaline phosphatase synthesis transcriptional regulatory protein phoP BAC0197 Protein 1e-31 42
phoP YP_005492678.1 alkaline phosphatase synthesis transcriptional regulatory protein phoP BAC0533 Protein 2e-35 42
phoP YP_005492678.1 alkaline phosphatase synthesis transcriptional regulatory protein phoP CP000647.1.gene4257. Protein 2e-35 42
phoP YP_005492678.1 alkaline phosphatase synthesis transcriptional regulatory protein phoP AE016830.1.gene2255. Protein 6e-38 41
phoP YP_005492678.1 alkaline phosphatase synthesis transcriptional regulatory protein phoP U35369.1.gene1.p01 Protein 6e-38 41
phoP YP_005492678.1 alkaline phosphatase synthesis transcriptional regulatory protein phoP NC_013450.8614146.p0 Protein 3e-40 41
phoP YP_005492678.1 alkaline phosphatase synthesis transcriptional regulatory protein phoP NC_002951.3238224.p0 Protein 3e-40 41
phoP YP_005492678.1 alkaline phosphatase synthesis transcriptional regulatory protein phoP NC_007793.3914065.p0 Protein 3e-40 41
phoP YP_005492678.1 alkaline phosphatase synthesis transcriptional regulatory protein phoP NC_002758.1121390.p0 Protein 3e-40 41
phoP YP_005492678.1 alkaline phosphatase synthesis transcriptional regulatory protein phoP NC_010079.5776364.p0 Protein 3e-40 41
phoP YP_005492678.1 alkaline phosphatase synthesis transcriptional regulatory protein phoP NC_002952.2859858.p0 Protein 3e-40 41
phoP YP_005492678.1 alkaline phosphatase synthesis transcriptional regulatory protein phoP NC_007622.3794948.p0 Protein 3e-40 41
phoP YP_005492678.1 alkaline phosphatase synthesis transcriptional regulatory protein phoP NC_003923.1003417.p0 Protein 3e-40 41
phoP YP_005492678.1 alkaline phosphatase synthesis transcriptional regulatory protein phoP BAC0125 Protein 1e-33 41
phoP YP_005492678.1 alkaline phosphatase synthesis transcriptional regulatory protein phoP EU250284.1.orf4.gene Protein 9e-39 41
phoP YP_005492678.1 alkaline phosphatase synthesis transcriptional regulatory protein phoP AM180355.1.gene1830. Protein 3e-38 41
phoP YP_005492678.1 alkaline phosphatase synthesis transcriptional regulatory protein phoP FJ349556.1.orf0.gene Protein 2e-39 41
phoP YP_005492678.1 alkaline phosphatase synthesis transcriptional regulatory protein phoP NC_002695.1.915041.p Protein 9e-36 41
phoP YP_005492678.1 alkaline phosphatase synthesis transcriptional regulatory protein phoP CP001138.1.gene4273. Protein 1e-35 41
phoP YP_005492678.1 alkaline phosphatase synthesis transcriptional regulatory protein phoP CP000034.1.gene3834. Protein 9e-36 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
phoP YP_005492678.1 alkaline phosphatase synthesis transcriptional regulatory protein phoP VFG1389 Protein 1e-34 44
phoP YP_005492678.1 alkaline phosphatase synthesis transcriptional regulatory protein phoP VFG1386 Protein 4e-40 42