Gene Information

Name : clpE (BMWSH_3974)
Accession : YP_005496163.1
Strain : Bacillus megaterium WSH-002
Genome accession: NC_017138
Putative virulence/resistance : Virulence
Product : ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3713687 - 3715801 bp
Length : 2115 bp
Strand : +
Note : -

DNA sequence :
ATGATTTGTCAAAACTGTAATAAACGTGAAGCGTCTATTCAATTAAACGTACAAACAAATAATCAAAAATCTCAATATCG
TTTATGTCATACATGTTACCAAGCGCTAATGAAAGAACATAAAATCCCATCAGGTTTTGGAGGTGGCGGCTTTATGAACA
TCGATGATTTATTCAAGCAAATGTCACAAGAACAAGCTGCACCGGAACAGCCGCAGCAAGGAAATGGCGGCAGCGGATTT
TTAGACCAGTTCGGTCGAAACTTAACTCAAATTGCGAAAACGGGATTAATTGACCCTGTTATTGGCCGCGAAGAAGAAGT
AGAGCGTGTCATTGAAATTTTAAATAGAAGAAACAAAAACAACCCGGTACTAATTGGAGAACCTGGCGTTGGTAAAACAG
CTGTTGTTGAAGGGTTAGCTTTAAAAATCGCAGAAGGAAAAGTTCCTGCCAAGCTGTTAAATAAAGATGTATATCTGTTA
GACGTAGCATCTCTCGTAGCTAATACGGGCGTTCGCGGTCAATTTGAAGAGCGCATGAAGCAGTTGATTTCTGAGCTTCA
ACAGCGAAAAAACGTGATTTTATTTATCGATGAAATTCACCTTCTTGTAGGAGCTGGTTCAGCGGAAGGTTCAATGGACG
CAAGCAATATTTTAAAACCAGCTCTTGCACGAGGCGAACTTCAAGTAGTCGGAGCTACAACTTTAAAAGAGTATCGTTCC
ATTGAAAAAGATGCGGCTCTTGAACGACGCTTCCAGCCGGTTATGGTTCACGAACCGTCTGTAGAAGAAGCCGTTGAAAT
TCTAAAAGGAATTCAAAGTAAATATGAAGATTATCACGGCGTTAGCTATACAGATGAAGCGATCCGCGCTTGTGTAAATT
TATCACACCGCTACATTCAAGATCGCTTCTTGCCTGATAAAGCAATTGACTTGCTAGATGAAGCAGGTTCAAAAATGAAC
TTACAGGCAGGCATTACAAATAAAGACGACGCGGCCGCTCGCTTAAAAGAAATTACAAAAGAAAAAGAGCAGGCGTTAAA
GAATGAAAAATATGAAGTAGCGGCAAAACTGCGCGATGAAGAAGCTGCTCTTGAAAAACAATTGAACGAAGAACAGAAAA
AAATGAATGTGGATATTGCTGACATTCAAGCAATTATTGAAAAGAAAACGGGTATCCCTGTTGGTAAACTTCAAGAAAAT
GAATCAGCAAAAATGAAACATTTAGCAGAGCACTTAGCTCAAAAAGTAATCGGACAGCAGGAAGCTGTAGAAAAAGTAGC
AAAAGCGATTCGACGTTCTCGCGCTGGATTAAAAGCGAAGCATCGCCCAATTGGTTCATTCTTATTTGTCGGTCCAACAG
GTGTCGGTAAAACAGAGTTAACCAAAACATTAGCTGAAGAACTATTCGGCTCAAAAGATGCTATGGTTCGTCTAGATATG
AGTGAATATATGGAAAAACACGCGGTGTCTAAATTAATCGGTTCCCCTCCTGGCTACGTAGGTCACGAAGAGGCAGGACA
ATTAACAGAGAAAGTACGCCGCAACCCTTATTCCATCATCTTACTAGATGAAATTGAAAAAGCTCATCCAGACGTTCAGC
ATATGTTTCTGCAAATTCTAGAAGACGGACGTCTAACAGATAGTCAAGGTCGCACAGTAAGCTTTAAAGACACAGTTATC
ATTATGACAAGTAACGCTGGTGTAGGTGAAAAGAAAATTACGGTTGGGTTTGACGCAGAAAATGACGCTCTTAAACAGGC
ATCCGTTTTAGATTCACTTTCATCTTATTTCAAACCAGAGTTTTTAAATCGATTTGATACAATCATTGAGTTTAATCACC
TTGAAAAAGATAACTTGATTAAAATCGTTGACCTTATGCTTGCTGAATTAAAAGAAACATTACAAGAACAAAACATCACG
CTGAGCGTAGCGGATGAGGTAAAAGAAAAACTGGCTGAACTTGGCTATCACCCTGCATTCGGTGCTAGACCGCTCCGCCG
AGCAATTCAAGAACAGCTTGAAGATCGAATTACAGATTTACTGTTAGATGACGGAGACGTATCTACAGTGAACGTAACGT
TAAATGAAGCAAGCGAAATCACCGTACAAAACTAA

Protein sequence :
MICQNCNKREASIQLNVQTNNQKSQYRLCHTCYQALMKEHKIPSGFGGGGFMNIDDLFKQMSQEQAAPEQPQQGNGGSGF
LDQFGRNLTQIAKTGLIDPVIGREEEVERVIEILNRRNKNNPVLIGEPGVGKTAVVEGLALKIAEGKVPAKLLNKDVYLL
DVASLVANTGVRGQFEERMKQLISELQQRKNVILFIDEIHLLVGAGSAEGSMDASNILKPALARGELQVVGATTLKEYRS
IEKDAALERRFQPVMVHEPSVEEAVEILKGIQSKYEDYHGVSYTDEAIRACVNLSHRYIQDRFLPDKAIDLLDEAGSKMN
LQAGITNKDDAAARLKEITKEKEQALKNEKYEVAAKLRDEEAALEKQLNEEQKKMNVDIADIQAIIEKKTGIPVGKLQEN
ESAKMKHLAEHLAQKVIGQQEAVEKVAKAIRRSRAGLKAKHRPIGSFLFVGPTGVGKTELTKTLAEELFGSKDAMVRLDM
SEYMEKHAVSKLIGSPPGYVGHEEAGQLTEKVRRNPYSIILLDEIEKAHPDVQHMFLQILEDGRLTDSQGRTVSFKDTVI
IMTSNAGVGEKKITVGFDAENDALKQASVLDSLSSYFKPEFLNRFDTIIEFNHLEKDNLIKIVDLMLAELKETLQEQNIT
LSVADEVKEKLAELGYHPAFGARPLRRAIQEQLEDRITDLLLDDGDVSTVNVTLNEASEITVQN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 2e-157 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
clpE YP_005496163.1 ATPase VFG0080 Protein 0.0 63
clpE YP_005496163.1 ATPase VFG0079 Protein 1e-158 55