Gene Information

Name : yfmF (BMWSH_3734)
Accession : YP_005495925.1
Strain : Bacillus megaterium WSH-002
Genome accession: NC_017138
Putative virulence/resistance : Virulence
Product : cobalamin/Fe3+-siderophore ABC transporter ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3497479 - 3498264 bp
Length : 786 bp
Strand : -
Note : -

DNA sequence :
ATGACAAAGTTAACTGCGGAAAAACTTTCGCTATCATATGATTCAACTTCAGTTATTCGCGATATTGACCTTCACATTCC
AGAAGGAAAGATAAGCATAATCATTGGATCAAATGGCTGCGGAAAATCAACAATCCTTCGTTCATTGGCGCGTCTATTAA
AGCCGACAGAAGGAAATATTTATTTAAACGGAAAAGATATTCATCAACATTCATCAAAAGAAGTAGCAAAAAAACTGGCT
ATTTTGCCTCAAGCTCCTGAAGCTCCTGAAGATTTAACAGTAAAAGAGCTATGCTATTATGGTCGTCACCCTCATAAAGG
CTTATTTGCTCGCTATTCTGCTGAAGATCATCAAATTGTAGAGGAGGCTTTACAGGCAACTAAACTGTCTAATTTAAGTC
ATCGCACACTGGATGCGCTCTCTGGAGGACAGCGTCAAAGGGCCTGGATTGCAATGGCATTAGTACAGGGTACGGAGCTT
CTGCTTTTGGACGAGCCTACCACATATTTAGATTTAGCTCATCAGATTGAAGTGCTTGAACTTCTTCGTTTCTTAAACCA
AAAGAGAAATTGTACAATTGTGATGGTCTTGCACGATTTAAACCAAGCAGCTCGCTATGCAGATCATTTAATCAGTATTT
CAAACGGTCAGATTTACAAAGAAGGTTCTCCTGCTCAAGTATTTACAGAAGAAATGATAAGAGATGTGTTTAATTTATCA
TCAACTATCATTCAAAATCCGGTTGATGGTTCACCTCTATGTATACCAACTGGAATCATAAAATAA

Protein sequence :
MTKLTAEKLSLSYDSTSVIRDIDLHIPEGKISIIIGSNGCGKSTILRSLARLLKPTEGNIYLNGKDIHQHSSKEVAKKLA
ILPQAPEAPEDLTVKELCYYGRHPHKGLFARYSAEDHQIVEEALQATKLSNLSHRTLDALSGGQRQRAWIAMALVQGTEL
LLLDEPTTYLDLAHQIEVLELLRFLNQKRNCTIVMVLHDLNQAARYADHLISISNGQIYKEGSPAQVFTEEMIRDVFNLS
STIIQNPVDGSPLCIPTGIIK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 5e-55 51
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 5e-55 51
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 4e-55 51
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 4e-55 51
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 6e-59 47
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 6e-59 47
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 2e-57 46
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 2e-58 46
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 4e-52 43
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-50 43
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-50 43
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-50 43
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-50 43
CDCE8392_1767 YP_005134301.1 iron complex transport system ATP-binding protein Virulence Not named Protein 8e-41 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
yfmF YP_005495925.1 cobalamin/Fe3+-siderophore ABC transporter ATPase BAC0164 Protein 2e-57 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
yfmF YP_005495925.1 cobalamin/Fe3+-siderophore ABC transporter ATPase VFG0925 Protein 2e-65 49
yfmF YP_005495925.1 cobalamin/Fe3+-siderophore ABC transporter ATPase VFG1042 Protein 1e-57 46