Gene Information

Name : ribD (BMWSH_3319)
Accession : YP_005495510.1
Strain : Bacillus megaterium WSH-002
Genome accession: NC_017138
Putative virulence/resistance : Unknown
Product : Riboflavin biosynthesis protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3099886 - 3100977 bp
Length : 1092 bp
Strand : -
Note : -

DNA sequence :
TTGATCAATCACGAATTTTATATGAATATAGCTTTACAAAACGCAAAAGCAACAAAAGGACAAACAGATCCAAATCCGCT
TGTAGGATCTGTCATTGTAAACGATAATCGAATCGTTGGAATCGGTACGCATTTAAAAGCGGGAGAGCCGCACGCTGAAA
TTCATGCGCTGCGAATGGCTGGTGAGCAAGCAAAAGGAGCGACTGCTTACGTAACGCTAGAGCCTTGTTCACACCACGGA
CGTACAGGTCCTTGTGCTGAAGCGCTAGTTAAAGCCGGTGTAAAAAAAGTGGTCATAGCAACTTTAGACCCAAATCCTTT
AGTAGCAGGTAATGGAGTTAACATTTTAGAAAACGCAGGCATTGAGGTCATAACCGGTGTATGTGAAGAAGAGTCACGTC
AAATGAATGAGGTCTTCAATAAGTATATTGTAACGAAGAAGCCGTTTGTTTCGTTAAAGTCAGCGATTACGTTAGACGGT
AAAATAGCAACTGCTTCTTCTCACAGCAAGTGGATTACGTCTGAGGAAGCTCGTTTGGATGTACATCAGCTGCGGCATGA
AACAGCGGGTATCTTAGTAGGGGTGAACACGGTTATTAAGGACAACCCCGAGCTGACAACTCGTATTGAAGGTGGCCGAA
GTCCAATTCGCATTGTAATGGATTCAAAGCTGCGCATGCCGCTTGATTCGAAGCTAGCAACGGATTCTTTAGCCCCTACG
TGGGTATTTACAAGTCAGAACTATTCAAAAGGAAAAAAAGAACAGCTCGAAAAGCAAGGCGTCGAAGTATTTGTCACAAG
CGGTGAGGACAAAGTAAATCTTGAAGATATGCTTTCTATACTAGGTGAGAAATTTGTGTCGTCTCTTTTAATTGAAGGAG
GGGGCGAAGTGAATGCCGCATTCCTAGAAAATCGTTTAATTGATAAACTGGTGCTGTATATGGCTCCAAAGCTTTCAGGA
GGAAAAGAAGCTCCTACTTTCCTAGAAGGAAAAGGTGTAGAAAAGATGTGGGATGCAGTGGACGTGGAGCGTCTTTCTAT
CACTTCAATCGGCAAAGACTTTAAATTTGTTGGATATCCTGTTTATAAATAA

Protein sequence :
MINHEFYMNIALQNAKATKGQTDPNPLVGSVIVNDNRIVGIGTHLKAGEPHAEIHALRMAGEQAKGATAYVTLEPCSHHG
RTGPCAEALVKAGVKKVVIATLDPNPLVAGNGVNILENAGIEVITGVCEEESRQMNEVFNKYIVTKKPFVSLKSAITLDG
KIATASSHSKWITSEEARLDVHQLRHETAGILVGVNTVIKDNPELTTRIEGGRSPIRIVMDSKLRMPLDSKLATDSLAPT
WVFTSQNYSKGKKEQLEKQGVEVFVTSGEDKVNLEDMLSILGEKFVSSLLIEGGGEVNAAFLENRLIDKLVLYMAPKLSG
GKEAPTFLEGKGVEKMWDAVDVERLSITSIGKDFKFVGYPVYK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB0868_00293 YP_008211619.1 Pyrimidine deaminase Not tested AbaR26 Protein 3e-55 45
BJAB07104_00289 YP_008207754.1 Pyrimidine deaminase Not tested AbaR25 Protein 3e-55 45