Gene Information

Name : yycF (BMWSH_0024)
Accession : YP_005492217.1
Strain : Bacillus megaterium WSH-002
Genome accession: NC_017138
Putative virulence/resistance : Virulence
Product : alkaline phosphatase synthesis transcriptional regulatory proteinphoP
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 22476 - 23189 bp
Length : 714 bp
Strand : +
Note : -

DNA sequence :
ATGATCATGGATAAACGTATTTTAGTCGTAGATGACGAAAAGCCGATTGCAGATATTTTAAAGTTTAATTTGCAAAAAGA
AGGTTACGAAGTATTTTGTGCTTATGATGGCGTAGAAGCACTTGAAAAAGTGGAAGAAGTACAGCCTGAAATGATTTTAT
TAGATATTATGCTTCCTCAGAAAGATGGAATGGAAGTTTGCCGAGAAGTGCGCAAAAAATATGATATGCCAATTATCATG
TTAACAGCAAAAGACTCTGAAATTGACAAAGTGTTAGGTCTAGAATTAGGTGCAGATGATTATGTAACTAAGCCGTTCAG
TACGCGTGAATTATTAGCACGTGTAAAAGCTAATTTACGTAGACATCAGCAAGTAGCTGTTCCAACAGAAGAAAGCGAAA
CGAATGAAATTACAATTGGAGCACTTGTTATTCACCCAGATGCTTATATCGTGTCTAAGCGCGGAGAAACGATTGAACTG
ACTCATCGTGAATTTGAGCTGCTGCATTATTTAGCGAAGCACATTGGACAAGTCATGACGCGTGAACACTTGCTTCAAAC
TGTATGGGGTTATGACTATTTTGGTGATGTGCGTACGGTAGATGTAACAGTTCGAAGATTACGTGAAAAAATTGAAGATA
ATCCAAGCCATCCAATGTGGATTGTAACAAGACGTGGAGTAGGCTATTATTTACGCAGCCCAGAGCAGGAGTAA

Protein sequence :
MIMDKRILVVDDEKPIADILKFNLQKEGYEVFCAYDGVEALEKVEEVQPEMILLDIMLPQKDGMEVCREVRKKYDMPIIM
LTAKDSEIDKVLGLELGADDYVTKPFSTRELLARVKANLRRHQQVAVPTEESETNEITIGALVIHPDAYIVSKRGETIEL
THREFELLHYLAKHIGQVMTREHLLQTVWGYDYFGDVRTVDVTVRRLREKIEDNPSHPMWIVTRRGVGYYLRSPEQE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 3e-32 41
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 1e-32 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
yycF YP_005492217.1 alkaline phosphatase synthesis transcriptional regulatory proteinphoP NC_012469.1.7685629. Protein 5e-67 68
yycF YP_005492217.1 alkaline phosphatase synthesis transcriptional regulatory proteinphoP NC_002952.2859905.p0 Protein 2e-55 57
yycF YP_005492217.1 alkaline phosphatase synthesis transcriptional regulatory proteinphoP NC_007793.3914279.p0 Protein 1e-55 56
yycF YP_005492217.1 alkaline phosphatase synthesis transcriptional regulatory proteinphoP NC_007622.3794472.p0 Protein 1e-55 56
yycF YP_005492217.1 alkaline phosphatase synthesis transcriptional regulatory proteinphoP NC_002745.1124361.p0 Protein 1e-55 56
yycF YP_005492217.1 alkaline phosphatase synthesis transcriptional regulatory proteinphoP NC_009782.5559369.p0 Protein 1e-55 56
yycF YP_005492217.1 alkaline phosphatase synthesis transcriptional regulatory proteinphoP NC_002951.3237708.p0 Protein 1e-55 56
yycF YP_005492217.1 alkaline phosphatase synthesis transcriptional regulatory proteinphoP NC_003923.1003749.p0 Protein 1e-55 56
yycF YP_005492217.1 alkaline phosphatase synthesis transcriptional regulatory proteinphoP NC_002758.1121668.p0 Protein 1e-55 56
yycF YP_005492217.1 alkaline phosphatase synthesis transcriptional regulatory proteinphoP NC_009641.5332272.p0 Protein 1e-55 56
yycF YP_005492217.1 alkaline phosphatase synthesis transcriptional regulatory proteinphoP NC_013450.8614421.p0 Protein 1e-55 56
yycF YP_005492217.1 alkaline phosphatase synthesis transcriptional regulatory proteinphoP HE999704.1.gene2815. Protein 1e-45 51
yycF YP_005492217.1 alkaline phosphatase synthesis transcriptional regulatory proteinphoP NC_012469.1.7686381. Protein 1e-41 50
yycF YP_005492217.1 alkaline phosphatase synthesis transcriptional regulatory proteinphoP AE016830.1.gene1681. Protein 8e-45 47
yycF YP_005492217.1 alkaline phosphatase synthesis transcriptional regulatory proteinphoP AM180355.1.gene1830. Protein 3e-40 46
yycF YP_005492217.1 alkaline phosphatase synthesis transcriptional regulatory proteinphoP FJ349556.1.orf0.gene Protein 9e-40 46
yycF YP_005492217.1 alkaline phosphatase synthesis transcriptional regulatory proteinphoP HE999704.1.gene1528. Protein 2e-30 44
yycF YP_005492217.1 alkaline phosphatase synthesis transcriptional regulatory proteinphoP AF155139.2.orf0.gene Protein 2e-36 44
yycF YP_005492217.1 alkaline phosphatase synthesis transcriptional regulatory proteinphoP AE000516.2.gene3505. Protein 4e-37 43
yycF YP_005492217.1 alkaline phosphatase synthesis transcriptional regulatory proteinphoP NC_013450.8614146.p0 Protein 5e-35 43
yycF YP_005492217.1 alkaline phosphatase synthesis transcriptional regulatory proteinphoP NC_002951.3238224.p0 Protein 5e-35 43
yycF YP_005492217.1 alkaline phosphatase synthesis transcriptional regulatory proteinphoP NC_007793.3914065.p0 Protein 5e-35 43
yycF YP_005492217.1 alkaline phosphatase synthesis transcriptional regulatory proteinphoP NC_002758.1121390.p0 Protein 5e-35 43
yycF YP_005492217.1 alkaline phosphatase synthesis transcriptional regulatory proteinphoP NC_010079.5776364.p0 Protein 5e-35 43
yycF YP_005492217.1 alkaline phosphatase synthesis transcriptional regulatory proteinphoP NC_002952.2859858.p0 Protein 5e-35 43
yycF YP_005492217.1 alkaline phosphatase synthesis transcriptional regulatory proteinphoP NC_007622.3794948.p0 Protein 5e-35 43
yycF YP_005492217.1 alkaline phosphatase synthesis transcriptional regulatory proteinphoP NC_003923.1003417.p0 Protein 5e-35 43
yycF YP_005492217.1 alkaline phosphatase synthesis transcriptional regulatory proteinphoP BAC0039 Protein 5e-30 43
yycF YP_005492217.1 alkaline phosphatase synthesis transcriptional regulatory proteinphoP CP000034.1.gene2186. Protein 5e-30 43
yycF YP_005492217.1 alkaline phosphatase synthesis transcriptional regulatory proteinphoP NC_002695.1.916589.p Protein 5e-30 43
yycF YP_005492217.1 alkaline phosphatase synthesis transcriptional regulatory proteinphoP AF130997.1.orf0.gene Protein 2e-37 42
yycF YP_005492217.1 alkaline phosphatase synthesis transcriptional regulatory proteinphoP NC_014475.1.orf0.gen Protein 3e-38 42
yycF YP_005492217.1 alkaline phosphatase synthesis transcriptional regulatory proteinphoP NC_005054.2598277.p0 Protein 3e-38 42
yycF YP_005492217.1 alkaline phosphatase synthesis transcriptional regulatory proteinphoP BAC0533 Protein 2e-32 42
yycF YP_005492217.1 alkaline phosphatase synthesis transcriptional regulatory proteinphoP NC_002695.1.915041.p Protein 2e-32 42
yycF YP_005492217.1 alkaline phosphatase synthesis transcriptional regulatory proteinphoP CP000647.1.gene4257. Protein 2e-32 42
yycF YP_005492217.1 alkaline phosphatase synthesis transcriptional regulatory proteinphoP CP000034.1.gene3834. Protein 2e-32 42
yycF YP_005492217.1 alkaline phosphatase synthesis transcriptional regulatory proteinphoP DQ212986.1.gene4.p01 Protein 1e-39 42
yycF YP_005492217.1 alkaline phosphatase synthesis transcriptional regulatory proteinphoP AF162694.1.orf4.gene Protein 3e-34 42
yycF YP_005492217.1 alkaline phosphatase synthesis transcriptional regulatory proteinphoP CP001918.1.gene5135. Protein 1e-27 42
yycF YP_005492217.1 alkaline phosphatase synthesis transcriptional regulatory proteinphoP CP004022.1.gene3215. Protein 3e-35 42
yycF YP_005492217.1 alkaline phosphatase synthesis transcriptional regulatory proteinphoP BAC0596 Protein 2e-28 42
yycF YP_005492217.1 alkaline phosphatase synthesis transcriptional regulatory proteinphoP CP001138.1.gene2239. Protein 2e-28 42
yycF YP_005492217.1 alkaline phosphatase synthesis transcriptional regulatory proteinphoP CP001918.1.gene3444. Protein 9e-29 42
yycF YP_005492217.1 alkaline phosphatase synthesis transcriptional regulatory proteinphoP CP000647.1.gene2531. Protein 7e-29 42
yycF YP_005492217.1 alkaline phosphatase synthesis transcriptional regulatory proteinphoP CP001485.1.gene721.p Protein 2e-28 41
yycF YP_005492217.1 alkaline phosphatase synthesis transcriptional regulatory proteinphoP EU250284.1.orf4.gene Protein 2e-35 41
yycF YP_005492217.1 alkaline phosphatase synthesis transcriptional regulatory proteinphoP CP001138.1.gene4273. Protein 5e-32 41
yycF YP_005492217.1 alkaline phosphatase synthesis transcriptional regulatory proteinphoP AE015929.1.gene1106. Protein 6e-30 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
yycF YP_005492217.1 alkaline phosphatase synthesis transcriptional regulatory proteinphoP VFG1389 Protein 2e-29 44
yycF YP_005492217.1 alkaline phosphatase synthesis transcriptional regulatory proteinphoP VFG1390 Protein 8e-36 43
yycF YP_005492217.1 alkaline phosphatase synthesis transcriptional regulatory proteinphoP VFG1563 Protein 8e-33 41
yycF YP_005492217.1 alkaline phosphatase synthesis transcriptional regulatory proteinphoP VFG1702 Protein 1e-32 41