Gene Information

Name : APA22_23440 (APA22_23440)
Accession : YP_005490849.1
Strain : Acetobacter pasteurianus IFO 3283
Genome accession: NC_017125
Putative virulence/resistance : Virulence
Product : urease alpha subunit
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2542721 - 2544427 bp
Length : 1707 bp
Strand : -
Note : -

DNA sequence :
ATGACACGTCTTTCCCGCTACGAATATGCAGGCCAGTTTGGCCCCACTACAGGGGATCGCGTGCGGCTGGCAGATACAGC
CTTGCTTGTAGAAGTAGAAAAAGATTTTACCATTTATGGAGAAGAAGCGCGGTTTGGTGGTGGAAAAACCATTCGTGATG
GTATGGGGCAATCGCAATTATCTCGTGCGCAAGGGGCCGCAGATACGGTTATCACAAACGCGCTGATTGTTGATCATTGG
GGTATTGTTAAAGCAGATGTTGCACTGCGTGATGGGCGCATTGCTGCAATAGGTAAAGCAGGAAACCCGGATATTCAGCC
TGGGGTAGATATTATTATTGGTCCGGGTACAGAAATAATTGCAGCAGAAGGTAAAATACTGACTGCGGGCGGAATTGATA
GTCATATTCACTATATTTGCCCACAACAAATAGAAGAAGCTCTATCTTCCGGTATAACCACTATGCTTGGTGGAGGTACC
GGACCAGCCACAGGTACCGCGGCCACAACATGTACACCTGGTCCGTGGCATTTGGCACGTATGCTCCAGGCAGCAGATGC
TTTTCCTGTTAATCTGGCATTTGCAGGTAAGGGGAATGCATCACGCCCTGAAGCATTGGAAGAAATGGTAAGGGCAGGGG
CGTGTTGCCTGAAATTGCATGAGGATTGGGGATCAACACCAGCGGCCATTGATTGTTGCTTGAGTGTGGCTGATCGCATG
GATGTTCAGGTGATGATTCATACAGACACGCTGAATGAAAGCGGGTTTGTAGAAGATACAATTGCAGCCTTCAAAGGGCG
CACCATTCATGCCTTTCATACAGAAGGTGCTGGTGGAGGGCATGCACCAGATATTATACGTGTAGCTGGTTTGCCAAATG
TTTTACCATCTTCTACCAACCCAACGCGCCCCTATACAGTTAATACGCTGGATGAGCATCTGGATATGTTGATGGTATGC
CATCATCTTGATCCGCAAATTCCAGAAGATATCGCTTTTGCAGAAAGCCGTATTCGGCGTGAGACCATTGCCGCTGAAGA
TATCTTCCAGGATATGGGCGTGCTTTCCATGATGTCATCTGACAGTCAGGCTATGGGGCGTGTGGGGGAAGTGCCTTTAA
GAACATGGCAAACAGCGCACAAAATGAAGCTCCAGCGTGGTGCGCTGTCTGGAGATGGTGCTGCAGATAATAACCGCGTT
AAACGCTATATTGCCAAATACACCATAAACCCGGCCATTGCGCATGGTCTTGCCCATGAGGTGGGGTCTATCGCAGTTGG
AAAATTGGCAGATCTTGTTTTGTGGGAGCCTGCTTTTTTTGGTGTAAAGCCAGAAATAGTGATTAAGGGCGGTGCAATTG
TTTATGCCATGATGGGGGACCCCAACGCTTCTATTCCCACCCCGCAACCGGTGCATGGCCGTATGATGTTTGGCGGATAT
GGTGGTGCACTTACACATACAAGCCTGACATTTGTTTCTCAGGCCGCACTGGAAGATGATTTAGGGCATAAACTTAAGCT
GCAACGTAAACTTTCAGCCGTGTCCAATACACGAGAAGGTATTGGTAAACGCAGCATGATCCATAATGATGCCATGCCGC
ATATCGAAGTAGACCCCGAAACGTATGAAGTGCGTGCTGATGGTGTGTTGCTGACATGCGAACCTGCAGAAGTTCTTCCT
ATGGCTCAAAGGTATTTTCTGTTCTGA

Protein sequence :
MTRLSRYEYAGQFGPTTGDRVRLADTALLVEVEKDFTIYGEEARFGGGKTIRDGMGQSQLSRAQGAADTVITNALIVDHW
GIVKADVALRDGRIAAIGKAGNPDIQPGVDIIIGPGTEIIAAEGKILTAGGIDSHIHYICPQQIEEALSSGITTMLGGGT
GPATGTAATTCTPGPWHLARMLQAADAFPVNLAFAGKGNASRPEALEEMVRAGACCLKLHEDWGSTPAAIDCCLSVADRM
DVQVMIHTDTLNESGFVEDTIAAFKGRTIHAFHTEGAGGGHAPDIIRVAGLPNVLPSSTNPTRPYTVNTLDEHLDMLMVC
HHLDPQIPEDIAFAESRIRRETIAAEDIFQDMGVLSMMSSDSQAMGRVGEVPLRTWQTAHKMKLQRGALSGDGAADNNRV
KRYIAKYTINPAIAHGLAHEVGSIAVGKLADLVLWEPAFFGVKPEIVIKGGAIVYAMMGDPNASIPTPQPVHGRMMFGGY
GGALTHTSLTFVSQAALEDDLGHKLKLQRKLSAVSNTREGIGKRSMIHNDAMPHIEVDPETYEVRADGVLLTCEPAEVLP
MAQRYFLF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ureC NP_286680.1 urease subunit alpha Virulence TAI Protein 2e-175 68
ureC NP_287088.1 urease subunit alpha Not tested TAI Protein 2e-175 68
ureC YP_005684266.1 Urease alpha subunit Not tested PiCp 7 Protein 6e-165 63
ureC YP_005682174.1 Urease alpha subunit Not tested PiCp 7 Protein 7e-165 63
ureC YP_003784325.1 urease subunit alpha Not tested PiCp 7 Protein 7e-165 63
ureC YP_005686358.1 Urease alpha subunit Not tested PiCp 7 Protein 7e-165 63

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
APA22_23440 YP_005490849.1 urease alpha subunit VFG0270 Protein 5e-145 61