Gene Information

Name : xerD (APA07_07890)
Accession : YP_005486524.1
Strain : Acetobacter pasteurianus IFO 3283
Genome accession: NC_017121
Putative virulence/resistance : Unknown
Product : phage DNA recombinase XerD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 823717 - 824637 bp
Length : 921 bp
Strand : +
Note : DNA integration/invertion protein

DNA sequence :
ATGCTAAGCGGGGGTGTTGATCTTTTTCTGGAGATGCTGGCTGCCGAGCGTGCAGCCGCCCCCAATACGCTGGCAGCGTA
TGAAGCAGACTTGACCTCCTGCGCTGAAAGTCTGGCGCGGGAGGGGCAAACCCTGCAAACGGCCACAACCGAGGGTTTGC
AAAACTGGATGGCTGCCTTGGTAGGCAGCGGGCAGGCGCGGCGCACGGTGGCGCGGCGCTTGTCCTGCATCCGGCAGTTT
TACCTGTTTCTGCTACGTGAAGGGATGCGTGCTGATAACCCGGCAGCGCATCTGGATAGCCCCAAACCCCACACACCCTT
GCCGCGTTTTTTATCCGAATCGGAAGTGCTTGCGCTGCTGAATGCCTGTGCAGAACCTGCTGGGGCATCCTTGGCTAAAA
AACGGCGCGGCATTTTGGCCAAGGCAGCGCTGGAACTGCTGTATGCCTCTGGCCTGCGTATTTCCGAATTATTGGCGCTC
CCACGCAAAGCCATAGCCGGTGACCAACGCATGATTATGGTGCGTGGCAAAGGCGGGCGGGAACGTTTAGTGCCACTTTC
AGACAGTGCGCGGGAAGCCGCGCAGGCTTTGCTGGAAGTGGACGCGCATTTGGAAAGTCCATTCCTTTTTCCCGGCCGCG
ACCCAGCAAAACCCATGACACGGCAGGCGTTTGACCGGATTCTGCACACAGTGGCCATACGGGCGGAAATTGATCCGGCG
CGTCTTTCCCCCCACGTGCTGCGCCATTCCTTTGCTACGCATTTGCTGGCGCATGGGGCAGATTTGCGGGCCTTGCAGAT
GTTGCTGGGGCATGCAGACATCGCCACCACCCAGATTTACACTCATGTGCAGACAGAACGCCTGCAAAAGGCCGTGCAGG
CGCATCACCCTCTGGCGGCGGATTCTGCCCACACCAAGTGA

Protein sequence :
MLSGGVDLFLEMLAAERAAAPNTLAAYEADLTSCAESLAREGQTLQTATTEGLQNWMAALVGSGQARRTVARRLSCIRQF
YLFLLREGMRADNPAAHLDSPKPHTPLPRFLSESEVLALLNACAEPAGASLAKKRRGILAKAALELLYASGLRISELLAL
PRKAIAGDQRMIMVRGKGGRERLVPLSDSAREAAQALLEVDAHLESPFLFPGRDPAKPMTRQAFDRILHTVAIRAEIDPA
RLSPHVLRHSFATHLLAHGADLRALQMLLGHADIATTQIYTHVQTERLQKAVQAHHPLAADSAHTK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 8e-40 41
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 8e-40 41