Gene Information

Name : smpB (APA07_11850)
Accession : YP_005486919.1
Strain : Acetobacter pasteurianus IFO 3283
Genome accession: NC_017121
Putative virulence/resistance : Unknown
Product : trans-translation helper factor SmpB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1244090 - 1244596 bp
Length : 507 bp
Strand : -
Note : SsrA-binding protein, transfer-messenger RNA (tmRNA)-binding protein

DNA sequence :
ATGAGCTCCAAATCTGGAAAATCTGCCAAAAGCTCCATGATCTCTCATGGCATGGTGGCGCAAAACCGTAAGGCGCGCTT
CAATTACAATATTCTGGAAACCATTGAGGCCGGGCTCGTACTAAAGGGCGCTGAAGTAAAAAGCCTGCGCCTTGGCCGTG
CCACCATTAACGAAGCCTTTGCTGGTGAACGCGATGGAGCGCTCTGGCTGTTCAACAGCTATATTCCCGAATACCAGGGG
GGCGTTCTTTCTCGCTTTGATACGCGCGCCCCGCGCAAGCTGCTGATGCACCGCAAGGAAATGCGCAAGTTTATAGGTGC
CATTGCCAAGCAGGGCGCAACACTTGTGCCCTTGAATGTGCATTTTAATGATAGAGGCTTAGCTAAAGTCACGCTCGGCT
TGGGCGTCGGTAAGAAAAGTCATGACAAGCGCCAGAGCATTGCAGACAGAGATTGGCAGCGTGACAAAGCGCGCCTAATT
CGGAACAAGGGGAAGGGAGACTACTAA

Protein sequence :
MSSKSGKSAKSSMISHGMVAQNRKARFNYNILETIEAGLVLKGAEVKSLRLGRATINEAFAGERDGALWLFNSYIPEYQG
GVLSRFDTRAPRKLLMHRKEMRKFIGAIAKQGATLVPLNVHFNDRGLAKVTLGLGVGKKSHDKRQSIADRDWQRDKARLI
RNKGKGDY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
smpB YP_001800894.1 SsrA-binding protein Not tested Not named Protein 9e-22 44
unnamed AET14351.1 SsrA-binding protein Not tested SaPI68111 Protein 1e-20 41