Gene Information

Name : kdpB (APA12_43110)
Accession : YP_005485220.1
Strain :
Genome accession: NC_017113
Putative virulence/resistance : Unknown
Product : potassium transporter ATPase B chain KdpB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 130545 - 132653 bp
Length : 2109 bp
Strand : +
Note : -

DNA sequence :
ATGGCACTCCATTTACCTCATTCCGAAGCCCCTCATGGAGGGCGGCATTCGGAACATCGCAGTCAGAGCAGTCTGATGCA
GGCGTCGCTTTTGCTGCCTGCGATCAGGGAGAGCTTCCGCAAGCTCGATCCGCGCATCATGTGGCGCAACCCGGTCATGT
TTGTCGTGGAGGTCGTGACCATTCTGACGACCGTCCTGCTCATACGCGACATAGTCGCCGGGGGAACACATCTTGGCTTT
GCGATCCAGATCAATCTCTGGCTCTGGTTTACACTCCTTTTCGCCAATTTCGCTGAAGCCGTCGCGGAAGGACGTGGCAA
GGCGCAGGCCGACAGTCTGCGTCGCACCCGGACTGAAACACTTGGCAAGCGTCTCTTGATGAATGACGAGGGCGGCTATT
CGCATCTCGGGTTGTATGAGGAAGTGCCAGCTCCCGAACTCGTAGTGGGGGACGTCGTGCTGGTTCAAGCTGGCGACTTC
ATTCCAAGCGACGGCGAAGTCGTCGACGGCATTGCGTCGGTTGATGAATCTGCCATCACCGGTGAATCCGCTCCAGTAAT
CCGCGAAAGCGGTGGTGATCGCTCCGCAGTGACAGGCGGCACGCGCGTCCTGTCAGACTGGGTCATTGTGAGGATTACAG
CAGCCCAGGGTTCCACCTTCCTTGATCGGATGATTTCGCTTGTCGAAGGCGCACAACGCCAGAAAACGCCTAACGAGATT
GCACTGACGATCCTGCTGGCGGGCATGACGCTGATCTTTATCTTCGCGGTCGCGACGATCCCGAGCTTCGTGCATTACGC
GGGCGGCCATATTTCGGTTCTGATCCTCGTCGCGCTGTTCGTGACGCTGATCCCGACGACCATCGGTGCTCTGCTTTCGG
CAATCGGTATCGCGGGTATGGATCGGCTGATCCGCTTCAATGTTCTCGCCATGTCGGGTCGCGCGGTAGAAGCAGCAGGG
GATGTCGATACGCTGCTACTCGACAAGACTGGTACGATTACTATTGGAGACAGGCAGGCTACAGCGTTTGTTCCTGTTTC
TGGCGTAACGGAACACGAACTTGCGGATGCCGCACAACTTGCATCTTTGGCTGATGAAACGCCGGAAGGGCGTTCGATCG
TGGTGCTGGCCAAGGAGAAATTTGGTATCCGGGGGCGTGATATGCGTGACCTCGGTGCGCATTTTGTCCCATTTACGGCG
CAAACCCGCATAAGCGGGGTAGACGTTGGGGACAGGCAGATCCGTAAGGGTGCGGTGGATAGTGTAATCGCAAGCCTCGG
GGAAACCCTGCCATCTGTCGAACAGATCCGTCAGATTGCCGACGACATCGCTCGTCAGGGTGGCACGCCGCTGGCAGTCG
CGGATAATACGCGCCTGCTTGGCGTAGTACATCTGAAAGACGTTGTAAAAGGAGGAATTCGCGAACGCTTTGCGGAACTA
CGCCGGATGGGGATCCGGACCGTCATGATCACCGGGGATAATCCCATGACGGCCGCAGCCATCGCAGCGGAGAGCGGCGT
GGACGATTTCCTGGCTCAGGCAACGCCAGAAGCGAAGCTTGCACTGATCCGTTCGGAACAGGCATCAGGCAAATTGGTGG
CAATGTGCGGAGATGGTACCAACGATGCTCCAGCGCTAGCCCAGGCCGATGTTGGCGTGGCCATGAATACTGGGACTGTT
GCCGCGCGTGAGGCCGGCAACATGGTTGATCTGGACAGTGATCCGACGAAACTCATTGAGATCGTGGGGATTGGTAAGCA
GCTGCTCATGACGCGTGGTGCCCTGACGACGTTTTCGATCGCCAACGACGTCGCCAAATATTTCGCCATCATTCCCGCCA
TGTTTGTTGGCTTCTATCCAGCACTTTCCGCGTTGAACATCATGCATCTTGCTACACCAGAAAGTGCGGTGCTCTCGGCG
ATCATCTTTAACGCCCTGATTATCATCGCGCTCATTCCTCTGGCGCTGAAGGGGGTTCGTTATCGTCCGGTCGGCGCGGC
ATCGCTTCTGCGGCGTAATCTTCTGGTTTACGGTATTGGCGGCCTTATCGTCCCGTTTATCGGAATCAAACTCATCGACA
TGCTCGTGACGAGCATCGGTCTGGCCTGA

Protein sequence :
MALHLPHSEAPHGGRHSEHRSQSSLMQASLLLPAIRESFRKLDPRIMWRNPVMFVVEVVTILTTVLLIRDIVAGGTHLGF
AIQINLWLWFTLLFANFAEAVAEGRGKAQADSLRRTRTETLGKRLLMNDEGGYSHLGLYEEVPAPELVVGDVVLVQAGDF
IPSDGEVVDGIASVDESAITGESAPVIRESGGDRSAVTGGTRVLSDWVIVRITAAQGSTFLDRMISLVEGAQRQKTPNEI
ALTILLAGMTLIFIFAVATIPSFVHYAGGHISVLILVALFVTLIPTTIGALLSAIGIAGMDRLIRFNVLAMSGRAVEAAG
DVDTLLLDKTGTITIGDRQATAFVPVSGVTEHELADAAQLASLADETPEGRSIVVLAKEKFGIRGRDMRDLGAHFVPFTA
QTRISGVDVGDRQIRKGAVDSVIASLGETLPSVEQIRQIADDIARQGGTPLAVADNTRLLGVVHLKDVVKGGIRERFAEL
RRMGIRTVMITGDNPMTAAAIAAESGVDDFLAQATPEAKLALIRSEQASGKLVAMCGDGTNDAPALAQADVGVAMNTGTV
AAREAGNMVDLDSDPTKLIEIVGIGKQLLMTRGALTTFSIANDVAKYFAIIPAMFVGFYPALSALNIMHLATPESAVLSA
IIFNALIIIALIPLALKGVRYRPVGAASLLRRNLLVYGIGGLIVPFIGIKLIDMLVTSIGLA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kdpB NP_814334.1 potassium-transporting ATPase subunit B Not tested Not named Protein 3e-162 60
ef0088 AAM75291.1 EF0088 Not tested Not named Protein 2e-162 60
SAR0071 YP_039539.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 6e-142 55
kdpB(SCCmec) NP_370597.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 6e-142 55
kdpB NP_373310.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 6e-142 55
kdpB YP_190029.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 6e-142 55
kdpB YP_251949.1 potassium-transporting ATPase subunit B Not tested SCCmec Protein 1e-143 55
kdpB BAA82181.1 potassium-transporting ATPase(B chanin) Not tested Type-II SCCmec Protein 5e-142 55