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Name : clpB (APA12_17450) Accession : YP_005481485.1 Strain : Acetobacter pasteurianus IFO 3283 Genome accession: NC_017108 Putative virulence/resistance : Virulence Product : Clp protease ATP-binding subunit ClpB Function : - COG functional category : - COG ID : - EC number : - Position : 1885149 - 1887764 bp Length : 2616 bp Strand : + Note : ATP-dependent DNA sequence : ATGGATATTGCAAAATTTACAGATCGTTCACGCGGCTTTTTGCAGGCTGCGCAAACAATAGCTTTACGTGATTTTAACCA GCAGCTTACGCCAGAGCATCTGCTCAAGGCCATGCTGGATGATAATGAAGGTGCTGCTTCCTCACTTATTCGCAGTGCTG GTGGCAACCCGGAAGCCGTAAAAGCCGCAACCGAACAGGCCTTGGCAAAACTGCCAAAAGTTCAGGGCAGCGGTGCTGGC CAACCCGCGGCAACACCGGAACTGGTGCGTATTCTGGATAATGCAGAACAAACCGCCCAGAAAGCTGGTGACAGCTTTGT TGCGCAGGATCGGCTGCTTGTTGCTATTGCTGCATCCGATACACCAGCAGGCCGCGCACTGAAAGAAAACGGTGCCTCGG CCGATACACTTGAAAAAGCTATTACGACCATTCGTAAAGGACGCACAGTGACCAGCGAAAACGCTGAAGCCAATTTTGAT GCGCTTAAAAAATATGCCCGTGATGTCACGGAAGTTGCCCTTAAAGGTAAACTGGACCCCGTTATTGGGCGTGATGAAGA AATCCGCCGTGCCATTCAGGTTCTGGCCCGCCGCAGCAAAAACAACCCGGTTCTGATTGGTGAACCCGGTGTGGGTAAAA CCGCTATTGTGGAAGGCTTGGCCCAGCGCATTGTAAATGGCGATGTGCCCGAAGCGCTGAAAAACAAAAAGCTGCTTTCC TTGGATATGGGCGCGCTGGTTGCCGGTGCCAAATATCGCGGTGAATTTGAAGAACGCCTGAAAGCTGTTCTGAAAGAAAT TGAATCCGCCGAAGGTCAGATCATCCTGTTTATTGATGAAATGCACACACTGGTTGGCGCAGGCCGTACCGATGGTGCGA TGGATGCTTCCAACCTCATCAAACCGGAACTGGCACGTGGTACACTGCACTGCATTGGCGCCACCACGCTGGATGAATAC CGCAAGTATATTGAAAAAGATGCAGCCCTTGCCCGCCGCTTCCAGCCAGTATTTGTGGGTGAGCCTTCTGTGGCGGATAC AATCTCTATTCTGCGCGGAATTAAGGAAAAATACGAACTCCATCACGGTGTACGTATTACCGATGGTGCACTGGTGGCAG CGGCAACGCTTTCCAACCGTTACATCACGGATCGATTCCTGCCCGATAAAGCGATTGACCTGATTGATGAGGCCGCAAGC CGTCTGCGCATGCAGATTGACAGCAAGCCAGAAGAACTGGACGAGCTGGACCGCCGCATCATTCAGCTGAAGATCGAACG TGAAGCTTTGCGCAAAGAAGATGATACTGCCAGCAAGGATCGTCTGGAAGCCGTAGAAGCTGAACTGGCGGATCTGGAAG AAAAGTCCAACACGCTCAGCGCTGCATGGCATGCTGAAAAGAACCGTGTGAACACCATTCAGAAGCTGCAGGAACAGCTT GATCAGGCGCGTTCTGATGTGGAAGTGGCACAGCGCAAGGGTGATCTGGGGCGTGCATCTGAACTGATGTATGGCGTTAT CCCCAACCTGCAGGCTCAGATTGCAGAAGCCCAGAAAACAGAAGAAGAAACCGCCAAAAAGGATGATCTGGTTTCCGAAG CTGTAACAGATCAGGGTGTGGCTTCTGTTGTGTCCCGCTGGACAGGTGTGCCGGTTGACCGGATGCTGGAAGGTGAACGC GCCAAGCTGCTGCGGATGGAAGATGAACTGCGTAAATCCGTGGTTGGTCAGGAACAGGCTCTTAAAGCTGTTTCCAACGC CGTGCGCCGTGCCCGTGCAGGCTTGCAGGACCCCAATCGCCCGATTGGTTCCTTCCTGTTCCTCGGCCCGACGGGTGTTG GTAAAACAGAGCTGACCAAAGCACTGGCCCGCTTCCTGTTTGATGATGATAAAGCCCTGCTGCGTATCGACATGAGCGAG TTCATGGAAAAACACGCAGTGGCCCGCCTGATTGGTGCCCCTCCGGGTTATGTGGGGTATGAAGAAGGTGGTGTGCTGAC AGAAGCCGTGCGCCGTCGCCCCTATCAGGTCATCCTGTTTGATGAAGTAGAAAAAGCACATGAAGACGTGTTCAACATTC TGCTTCAGGTGCTGGATGATGGCCGCCTGACCGATGGTCAGGGCCGCACGGTGGACTTCCGCAACACTCTTATCATTCTC ACCAGTAACTTGGGTTCTGAATATCTAGCCAACCTGCCGGATGGGGAATCTCCCGATATGGTGCAGGCTCAGGTGATGAA GGTTGTGCGTGAGCACTTCCGTCCTGAATTCCTGAACCGTCTGGATGAAATCATCCTGTTCTCGCGGTTGCAGAAAGCAG ACATGACCAAGATTGTGGATATCCAGATTGCACGCCTGCAGCAGCTGCTGGATGATCGTAAGATCACCTTGCATCTGGAT AATCTGGCCGAAGCTTGGCTGGCGAATGAAGGGTATGACCCCATTTATGGTGCACGCCCGCTTAAAAGGGTTATTCAGCG CACGCTGCAAAACCCGCTGGCAGAACAGCTTCTGGAAGGCAATATCCTTGATGGAGAAACAGTAAATATCTCCGCCAATG GTGATGGCCTGCTGATTAACGGTAAAACCGCAGCGCAGACAGAAGCCGCCATGTAA Protein sequence : MDIAKFTDRSRGFLQAAQTIALRDFNQQLTPEHLLKAMLDDNEGAASSLIRSAGGNPEAVKAATEQALAKLPKVQGSGAG QPAATPELVRILDNAEQTAQKAGDSFVAQDRLLVAIAASDTPAGRALKENGASADTLEKAITTIRKGRTVTSENAEANFD ALKKYARDVTEVALKGKLDPVIGRDEEIRRAIQVLARRSKNNPVLIGEPGVGKTAIVEGLAQRIVNGDVPEALKNKKLLS LDMGALVAGAKYRGEFEERLKAVLKEIESAEGQIILFIDEMHTLVGAGRTDGAMDASNLIKPELARGTLHCIGATTLDEY RKYIEKDAALARRFQPVFVGEPSVADTISILRGIKEKYELHHGVRITDGALVAAATLSNRYITDRFLPDKAIDLIDEAAS RLRMQIDSKPEELDELDRRIIQLKIEREALRKEDDTASKDRLEAVEAELADLEEKSNTLSAAWHAEKNRVNTIQKLQEQL DQARSDVEVAQRKGDLGRASELMYGVIPNLQAQIAEAQKTEEETAKKDDLVSEAVTDQGVASVVSRWTGVPVDRMLEGER AKLLRMEDELRKSVVGQEQALKAVSNAVRRARAGLQDPNRPIGSFLFLGPTGVGKTELTKALARFLFDDDKALLRIDMSE FMEKHAVARLIGAPPGYVGYEEGGVLTEAVRRRPYQVILFDEVEKAHEDVFNILLQVLDDGRLTDGQGRTVDFRNTLIIL TSNLGSEYLANLPDGESPDMVQAQVMKVVREHFRPEFLNRLDEIILFSRLQKADMTKIVDIQIARLQQLLDDRKITLHLD NLAEAWLANEGYDPIYGARPLKRVIQRTLQNPLAEQLLEGNILDGETVNISANGDGLLINGKTAAQTEAAM |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 4e-102 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpB | YP_005481485.1 | Clp protease ATP-binding subunit ClpB | VFG2076 | Protein | 1e-118 | 43 |
