Gene Information

Name : APA42C_40190 (APA42C_40190)
Accession : YP_005479433.1
Strain :
Genome accession: NC_017104
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 21336 - 22163 bp
Length : 828 bp
Strand : +
Note : Integrase core domain

DNA sequence :
ATGAAGCGGCCAGCCCAGCGCCGGGAACTGGCCGCACAGGCTGTGGCGCATCATGGGGTCAGCATTGCGCTGGCCTGTCG
GATTTTTGGGATATCCGAGACCTGCTTTCGCTATCGTCCGCGACTGGCAGCGGAGAATGACAGGATTGCCGATCTTCTTG
TGGGACTGACCCAGGCTCACAGGAGATGGGGATTTGGTCTGTGTTTCCTGTATCTGCGCAATGTGCAGGGACATGTCTGG
AATCATAAGCGGGTTTATCGGATCTATCGGGAACTGGAACTCAACCTGCGGATTAAACCCCGCAGGCGTCTTGTTCGCGA
AAAGCCTGAAAAGCTGTCGGTTCCGGCCCTTCCCAACACGGTCTGGTCCATGGACTTCATGGCGGACAGGCTTTTGGATG
GACGTGCTTTTCGGCTCCTGAACATCCTGGATGAGTTCAATCGTGAAGGACTGGCGATCGAGGTTGATTTTTCCCTGCCG
GCCTGTCGGGTTGTCCGCTGTCTGGAACAGGTTATGGAGTGGCGCGGCAGGCCAGAAGCCATCCGAATGGATAATGGCCC
TGAATATGTCAGTCATACGTTGGTTTCATGGGCCGAAAAACAGGGGATTACCCTGATCTATACGCAACCGGGTAATCCGC
AGCAGAACGCCTATATTGAACGCTACAACAGAACTGTCCGGCAGGAATGGCTGGAGCAGTATCTGTTTGAAAGCATTCAG
GACGTGCAGGAGGTCGCAACACAATGGCTCTGGACATATAACCATGACAGACCCAACATGGGGAACAGCGGGCTAACCCC
CGCCCAGAAACTAAAAACAGCTGCCTGA

Protein sequence :
MKRPAQRRELAAQAVAHHGVSIALACRIFGISETCFRYRPRLAAENDRIADLLVGLTQAHRRWGFGLCFLYLRNVQGHVW
NHKRVYRIYRELELNLRIKPRRRLVREKPEKLSVPALPNTVWSMDFMADRLLDGRAFRLLNILDEFNREGLAIEVDFSLP
ACRVVRCLEQVMEWRGRPEAIRMDNGPEYVSHTLVSWAEKQGITLIYTQPGNPQQNAYIERYNRTVRQEWLEQYLFESIQ
DVQEVATQWLWTYNHDRPNMGNSGLTPAQKLKTAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
trp1400B CAB46580.1 IS1400 transposase B Not tested HPI Protein 3e-50 45