Gene Information

Name : APA42C_41230 (APA42C_41230)
Accession : YP_005479536.1
Strain :
Genome accession: NC_017104
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 133406 - 134233 bp
Length : 828 bp
Strand : -
Note : Integrase core domain

DNA sequence :
ATGAAGCGGCCAGCCCAGCGCCGGGAACTGGCCGCACAGGCTGTGGCGCATCATGGGGTCAGCATTGCGCTGGCCTGTCG
GATTTTTGGGATATCCGAGACCTGCTTTCGCTATCGTCCGCGACTGGCAGCGGAGAACGACAGGATTGCCGATCTTCTTG
TGGGACTGACCCAGGCTCACAGGAGATGGGGATTTGGTCTGTGTTTCCTGTATCTGCGCAATGTGCAGGGACAGCTCTGG
AATCATAAGCGGGTTTATCGGATCTATCGGGAACAGGAACTCAACCTGCGGATTAAACCCCGCAGGCGTCTGGTTCGCGA
AAAGCCTGAAAAGCTGTCGGTTCCGGCCCTTCCCAACAGGGTCTGGTCCATGGATTTTATGGCGGACAGGCTGATGGATG
GACGTGCTTTTCGGCTCCTGAACATTCTGGATGACTTCAATCGTGAAGGACTGGCGATCGAGGGTGATTTTTCCCTGCCA
GCCTGTCGGGTTGTCCGCTGTCTGGAACAGGTTATGGAGTGGCGTGGCAGGCCAGAAGCCATCCGAATGGATAATGGCCC
TGAATATGTCAGTCATACGTTGGTTCCATGGGCCGAAAAACAGGGGATTACCCTGATCTATACGCAACCGGGTAATTCGC
AGCAGAACGCCTCTATTGAACGCTACAACAGAACTGTCCGGCAGGAATGGCTGGAGCAGTATTTGTTTGAAAGCATTCAG
GACGTGCAGGAGGTCGCAACACAATGGCTCTGGACATATAACCATGACAGACCCAACATGGGGAACAGCGGGCTAACCCC
CGCCCAGAAACTAAAAACAGCTGCCTGA

Protein sequence :
MKRPAQRRELAAQAVAHHGVSIALACRIFGISETCFRYRPRLAAENDRIADLLVGLTQAHRRWGFGLCFLYLRNVQGQLW
NHKRVYRIYREQELNLRIKPRRRLVREKPEKLSVPALPNRVWSMDFMADRLMDGRAFRLLNILDDFNREGLAIEGDFSLP
ACRVVRCLEQVMEWRGRPEAIRMDNGPEYVSHTLVPWAEKQGITLIYTQPGNSQQNASIERYNRTVRQEWLEQYLFESIQ
DVQEVATQWLWTYNHDRPNMGNSGLTPAQKLKTAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
trp1400B CAB46580.1 IS1400 transposase B Not tested HPI Protein 2e-47 45