Gene Information

Name : Spiaf_0064 (Spiaf_0064)
Accession : YP_005473880.1
Strain : Spirochaeta africana DSM 8902
Genome accession: NC_017098
Putative virulence/resistance : Virulence
Product : nucleotide sugar dehydrogenase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 69833 - 70999 bp
Length : 1167 bp
Strand : +
Note : PFAM: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; UDP-glucose/GDP-mannose dehydrogenase family, central domain; UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain; TIGRFAM: nucleotide sugar dehydrogenase

DNA sequence : 
ATGAAGATTGCGGTTGCGGGTACCGGCTATGTGGGGCTGTCGAATGCGGTGTTGCTGGCGCAGCAGAATACGGTGGTGGC
GCTGGATATTGTGCCGGAGAAGGTGGCGCAGATAAATGCGCGGCGCTCGCCGATTGCGGATGCGGAGATCGAGGATTTCC
TGGCAAACCGGGAGCTTGATCTTACGGCGACTACCGACAAGGTGGCGGCCTACAGCGATGCGGTGTTTGTGATTATTGCG
ACCCCGACCGATTACGATCCGAAGACGAACTATTTCAATACCAGAACGGTGGAGGCGGTGATCGCGGATGTGCTGGAGAT
CAATCCGCAGGCGACGATGATTATAAAGTCGACGGTGCCGGTCGGGTACACGCGCGAGGTGCGGGCGCAGTTCGAGAGCG
ATAATATCCTGTTTTCACCGGAGTTTTTGCGCGAGGGCAAGGCGTTGTACGATAATCTGCATCCGAGCCGGATTGTGGTG
GGCGAGCAGTCGCCGCGGGCGGAGCGGTTTGCGGATCTACTGGCGGCGGCGGCCGAGAAGAAAGATGTGCCGGTGCTGTT
TACCAACTCGACCGAGGCGGAGGCGATCAAGCTGTTTTCCAATACGTATCTGGCGATGCGGGTGGCCTACTTTAACGAGC
TGGACAGCTATGCCGAGGCGCACGGGCTGGATGCCAAGCAGATTATCGAGGGGGTCGGGCTGGATCCGCGGATCGGGACG
CATTACAACAACCCGAGTTTCGGCTACGGGGGCTATTGTCTGCCGAAGGATACCAAGCAGCTGCTGGCGAACTACGATGC
GGTGCCGAACAACCTGATCAAGGCGATTGTTGATGCGAACCGGACGCGCAAGGATTATGTGGCCGATCGGATCCTGGCGC
GCAAGCCGGAGGTAGTGGGGGTGTATCGGCTTACCATGAAGACCGACAGCGACAACTTCCGGGCGTCGGCGGTGCAGGGG
ATCATGAAACGGATCAAGGCGAAGGGTGTCGAGGTGGTGGTGTACGAGCCGGTGCTGACCGAGGATGAGTTTTTTAACAG
CCGGGTTATCCGGGATTTCGAGGAATTCAAGCGGATGAGCGATGTGATTGTAACCAACCGCCTGCACGACGAGCTTATGG
ATGTGCAGGACAAGGTCTACACGCGGGACTTGTTCAGCCGGGATTGA

Protein sequence : 
MKIAVAGTGYVGLSNAVLLAQQNTVVALDIVPEKVAQINARRSPIADAEIEDFLANRELDLTATTDKVAAYSDAVFVIIA
TPTDYDPKTNYFNTRTVEAVIADVLEINPQATMIIKSTVPVGYTREVRAQFESDNILFSPEFLREGKALYDNLHPSRIVV
GEQSPRAERFADLLAAAAEKKDVPVLFTNSTEAEAIKLFSNTYLAMRVAYFNELDSYAEAHGLDAKQIIEGVGLDPRIGT
HYNNPSFGYGGYCLPKDTKQLLANYDAVPNNLIKAIVDANRTRKDYVADRILARKPEVVGVYRLTMKTDSDNFRASAVQG
IMKRIKAKGVEVVVYEPVLTEDEFFNSRVIRDFEEFKRMSDVIVTNRLHDELMDVQDKVYTRDLFSRD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0068 YP_300158.1 UDP-glucose 6-dehydrogenase Not tested SCC15305cap Protein 2e-86 60

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Spiaf_0064 YP_005473880.1 nucleotide sugar dehydrogenase VFG0963 Protein 1e-98 55