Gene Information

Name : Spiaf_2313 (Spiaf_2313)
Accession : YP_005476052.1
Strain : Spirochaeta africana DSM 8902
Genome accession: NC_017098
Putative virulence/resistance : Virulence
Product : antimicrobial peptide ABC transporter ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2618422 - 2619102 bp
Length : 681 bp
Strand : -
Note : PFAM: ABC transporter

DNA sequence : 
ATGATGGATGTACGCAGCCTGCACAAGGAGTACTGGATGGGCCCCAGTCGTATCAAGGCCCTGAACGGGGTGACCTTTCG
AATCGATCGTGGAGAGTTTGTCGCCATTGCGGGTCCCAGCGGATCAGGTAAATCAACCCTGATGAACATCCTTGGCTGCC
TTGATACCCCGAGTGCCGGCAGCTACTTTCTCGCTGGTGATGAGGCATCGGGACTGAGTACCGAACAGCTGGCGGCAACC
CGCAATCGGCATATCGGGTTCGTGTTCCAAAGCTTTAATCTTCTCCCGCGGGCGAATGCCCTGGAAAATGTGGAGCTCCC
GCTGGTGTATCGGGGGATGCCGGCCAGACAACGGCGGGAGGCTGCCGGTGCAGTGCTGGATCTGGTCGGGCTCTCGGATC
GTCTGCAGCATCTGCCAAGCGAATTGTCCGGAGGGCAACGGCAGCGAGTGGCCATTGCCCGGGCACTGGTTGGTAATCCT
GCGGTTGTGCTTGCAGATGAGCCGACAGGGGCGCTGGACACCCACACCGGTGAGGAGATTATGCGATTGTTTACCTCGCT
GCAGCAGCGCGGGGTCACGCTGATAATGGTTACCCATGACCAGGATCTCGCGAATCGGGCCGAACGGGTGATACGATTGC
TGGATGGAAGGATCGTATCGGATTCACGGAGGGCGGAATGA

Protein sequence : 
MMDVRSLHKEYWMGPSRIKALNGVTFRIDRGEFVAIAGPSGSGKSTLMNILGCLDTPSAGSYFLAGDEASGLSTEQLAAT
RNRHIGFVFQSFNLLPRANALENVELPLVYRGMPARQRREAAGAVLDLVGLSDRLQHLPSELSGGQRQRVAIARALVGNP
AVVLADEPTGALDTHTGEEIMRLFTSLQQRGVTLIMVTHDQDLANRAERVIRLLDGRIVSDSRRAE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-31 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-32 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 5e-32 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-32 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Spiaf_2313 YP_005476052.1 antimicrobial peptide ABC transporter ATPase NC_012469.1.7686878. Protein 2e-58 55
Spiaf_2313 YP_005476052.1 antimicrobial peptide ABC transporter ATPase NC_008702.1.4606598. Protein 9e-43 50
Spiaf_2313 YP_005476052.1 antimicrobial peptide ABC transporter ATPase CP001581.1.gene598.p Protein 9e-44 43
Spiaf_2313 YP_005476052.1 antimicrobial peptide ABC transporter ATPase CP001581.1.gene798.p Protein 3e-41 43
Spiaf_2313 YP_005476052.1 antimicrobial peptide ABC transporter ATPase NC_012469.1.7685735. Protein 3e-34 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Spiaf_2313 YP_005476052.1 antimicrobial peptide ABC transporter ATPase VFG2059 Protein 2e-17 42