Gene Information

Name : Spiaf_2109 (Spiaf_2109)
Accession : YP_005475864.1
Strain : Spirochaeta africana DSM 8902
Genome accession: NC_017098
Putative virulence/resistance : Unknown
Product : ATP-dependent carboxylate-amine ligase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2393466 - 2394836 bp
Length : 1371 bp
Strand : -
Note : PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; AAA domain (dynein-related subfamily); TIGRFAM: ATP-dependent protease HslVU, ATPase subunit

DNA sequence :
ATGAAGATCAACATCGAGCAGATGACACCGGCAGAAATTGTAGCCGAGCTGGACAAGTTTATCATCGGGCAGCAGCAGGC
AAAAAAAGCGGTCGCCATCGCCCTGCGAAATCGGGTGCGCCGGGATCGGTTGTCTGAGGAACTCAGGGACGAGGTCTCGC
CCAAGAACATCATTATGATCGGTCCAACCGGTGTGGGTAAGACCGAGATTGCGCGTCGCCTGTCAAAGCTGACCGGGGCG
CCGTTTCTGAAGGTAGAGGCCACTAAATATACCGAGGTCGGCTATGTGGGGCGTGATGTCGAGTCGATGGTACGCGACCT
CATGTCTTCCGGGGTCGCCATGGTCAAGGCTGAGCAGCAGGAGCGGGTGCGGGAGGAGGCCGAGAAGCGCACCGAGGAGC
AGCTGCTGGATCTGCTCCTGCCCGGTGTCAAGCCCGCCAAACCTCCCGTAGAGGATGACGAAACAGCGCATTCCGCAGTC
ACGGAGGAGGCCGGTTCCTCTACCCGGGAGAAATTCCGGCGCAAGCTTCGCAATGGGGATCTTGATGACAAAGAGGTTGA
GGTGAATATCACCAAACAGAACTTTCCGGCTATCGAGATTTTTTCCGGTTCCAGCTTCGAGGAAATGGAGATGAATCTGG
GCGGGCTTGGCGGATTGCTTGGCGGCAAAAAAAAGAAGAAGCGTACTACCGTAAAGCGCGCCCGCGAGATTCTGCTTGCG
GATGAAATGGAAAAGCTGGTTGATACCGAACAGGTGGCCGATCTGGCCCGGCAGCGTGTCGAACAGATGGGGATTATCTT
TATCGATGAGGTCGACAAGATAGCGGCCAAGGAATCCCGCTCAGGGGCAGATGTCAGTCGGGAGGGGGTCCAGCGGGATA
TCCTGCCGATCGTTGAGGGATCCCAGGTGAATACCAAGTACGGGATGGTTGATACCAGTCACATTCTTTTTATTGCTGCC
GGGGCATTCCATACCTCCAAGCCCAGTGATCTGATTCCCGAGTTGCAGGGGCGTTTCCCGTTGCGTGTCGAGCTTGAGCC
GCTGGATGCCGATGCCTTTTATCTGATTCTCACCCAGCCGCAGAATTCGCTGATCCGGCAGTACACCGAGCTCTTGAAGA
CAGAGGACGTATTCCTGGAGTTCAGCGAGGAGGCTATTCGTGAAATTTGTCGTATCGCCGCCGAGGTGAACTCCCGTTCA
GAGAATATCGGTGCCCGGCGCCTGCACACCGTTATGGAGGTACTGCTGGAGGATGTCAGCTTTACCGCCACCGATCTGGC
CGGACAGACCATTCCGATTACGCCGCAGTATGTGCAGGAGCGGCTTGGTGAGATAATTCAAGACCAGGACTTAAGTCGGT
ATATTCTTTAG

Protein sequence :
MKINIEQMTPAEIVAELDKFIIGQQQAKKAVAIALRNRVRRDRLSEELRDEVSPKNIIMIGPTGVGKTEIARRLSKLTGA
PFLKVEATKYTEVGYVGRDVESMVRDLMSSGVAMVKAEQQERVREEAEKRTEEQLLDLLLPGVKPAKPPVEDDETAHSAV
TEEAGSSTREKFRRKLRNGDLDDKEVEVNITKQNFPAIEIFSGSSFEEMEMNLGGLGGLLGGKKKKKRTTVKRAREILLA
DEMEKLVDTEQVADLARQRVEQMGIIFIDEVDKIAAKESRSGADVSREGVQRDILPIVEGSQVNTKYGMVDTSHILFIAA
GAFHTSKPSDLIPELQGRFPLRVELEPLDADAFYLILTQPQNSLIRQYTELLKTEDVFLEFSEEAIREICRIAAEVNSRS
ENIGARRLHTVMEVLLEDVSFTATDLAGQTIPITPQYVQERLGEIIQDQDLSRYIL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hslU YP_003728753.1 heat shock protein HslU Not tested cag PAI Protein 3e-87 50