Gene Information

Name : Spiaf_1216 (Spiaf_1216)
Accession : YP_005475001.1
Strain : Spirochaeta africana DSM 8902
Genome accession: NC_017098
Putative virulence/resistance : Unknown
Product : 50S ribosomal protein L19
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1393059 - 1393415 bp
Length : 357 bp
Strand : +
Note : PFAM: Ribosomal protein L19; TIGRFAM: ribosomal protein L19, bacterial type

DNA sequence :
ATGGACGCGATTAAAGCAGTCGAAAATACGCAGTTGAAAGAGGGACGTGACGATTTCCGCATCGGCGATACGGTAAAGGT
TCACTTTAACATCGTCGAGGGAAAGACCGAGCGTATCCAGGTATACGAGGGTATAGTTATCCAGCGAGCCAACGAGGGTT
CTCGCGCATCCTTTACCGTACGCAAGATTTCTTACGGTGTCGGGGTAGAGCGTGTGTTTCCGACCCACTCGCCGCGCATC
CAGCGCATCGAGGTCGTGCGACGCGGTCGCGTACGTCGAGCCAAGCTGTACTATCTGCGTGACCGTGTTGGTAAAGCCGC
CAAGGTTCGCGAGCTTATCAAAAAGAAAGTAAAGTAG

Protein sequence :
MDAIKAVENTQLKEGRDDFRIGDTVKVHFNIVEGKTERIQVYEGIVIQRANEGSRASFTVRKISYGVGVERVFPTHSPRI
QRIEVVRRGRVRRAKLYYLRDRVGKAAKVRELIKKKVK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rplS CAA68924.1 ribosomal protein L19 Not tested Internalin Protein 2e-20 57
rplS AAS66827.1 50S ribosomal subunit protein Not tested SSR-1 Protein 3e-20 56