Gene Information

Name : rplS (CSE_06100)
Accession : YP_005472839.1
Strain : Caldisericum exile AZM16c01
Genome accession: NC_017096
Putative virulence/resistance : Unknown
Product : 50S ribosomal protein L19
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 583188 - 583583 bp
Length : 396 bp
Strand : +
Note : -

DNA sequence :
ATGAAGGACATTTTGAAAGAGGTAGAGAAGGAATATTTAAAAGAAAGACCTAACTTTAATGTTGGTGATACCATTAGAGT
GCATGCGATTGTGAAAGAAGGCGGAAAAGAAAGAGTTCAGGTCTTTGAAGGAGTAGTCATTGCAAAAAAAGGCGGCGGCA
TTAACGAAACTTTCACTGTAAGGAAGGTTTCATATGGAGTTGGTGTAGAAAGAGTTTTCCCTCTACATTCCCCATTAATT
AAGAAGATTGAAATTAAAAGAAAAGGTGATGTAAGAAGAGCAAAACTATATTACCTAAGGGAAAGACTTGGTAAGGCACA
AAATGTAAAAGAAAAGGTTGAAAGCGCTGCAAAAGCACAAAGCGAAACTACCCAAGAGGAAAATATTGAGAACTAA

Protein sequence :
MKDILKEVEKEYLKERPNFNVGDTIRVHAIVKEGGKERVQVFEGVVIAKKGGGINETFTVRKVSYGVGVERVFPLHSPLI
KKIEIKRKGDVRRAKLYYLRERLGKAQNVKEKVESAAKAQSETTQEENIEN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rplS CAA68924.1 ribosomal protein L19 Not tested Internalin Protein 9e-28 59
rplS AAS66827.1 50S ribosomal subunit protein Not tested SSR-1 Protein 2e-26 54