Gene Information

Name : ssb (CSE_03360)
Accession : YP_005472565.1
Strain : Caldisericum exile AZM16c01
Genome accession: NC_017096
Putative virulence/resistance : Unknown
Product : single-stranded DNA-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 328347 - 328745 bp
Length : 399 bp
Strand : -
Note : protein synonym:helix-destabilizing protein

DNA sequence :
ATGTCTGATGTAAATAGAATTTTCTTAACAGGACGTCTTGTTGCAGATCCTGATATCCGCTACACTCCAACAGGAAACGA
GGTTGCTCAATTTAGGATTGCGGTAAACATGAGATACCGAAGTAAGCAAGACCCTACAAATTGGCAAGAAGAAACCTCAT
TTATTACCATTATTGCTTGGAACAAACTTGCCGACAAAGTCGAAAAGACATTTAAAAAAGGTGATCTTATATTTGTTGAA
GGAAGACTTAGAATTCGTGAATACGAAGTTGAAGGGAACAAAAGATATGCAACGGAAGTAGTTGCAAGAGATATAAAACT
CATCGTAGCAAAAGGTGCAAAGGAAATTGAAATTGAAGAGGCTACTGATGAGTCAGAACCAGATGTACCATTTGCATAG

Protein sequence :
MSDVNRIFLTGRLVADPDIRYTPTGNEVAQFRIAVNMRYRSKQDPTNWQEETSFITIIAWNKLADKVEKTFKKGDLIFVE
GRLRIREYEVEGNKRYATEVVARDIKLIVAKGAKEIEIEEATDESEPDVPFA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
MW1921 NP_646738.1 single-strand DNA-binding protein Not tested ¥ÕSa3 Protein 6e-15 43
SAKOR_01963 YP_008492151.1 Single-strand DNA binding protein Not tested ¥ÕSa3 Protein 3e-15 42
SAUSA300_1958 YP_494609.1 single-strand binding protein Not tested ¥ÕSa3 Protein 7e-15 42
SAUSA300_1958 YP_494609.1 single-strand binding protein Not tested ¥ÕSa3 Protein 7e-15 42
SAV1983 NP_372507.1 single-strand DNA-binding protein Not tested ¥ÕSa3 Protein 5e-15 42
SA1792 NP_375091.1 single-strand DNA-binding protein Not tested ¥ÕSa3 Protein 5e-15 42
SH1792 YP_253707.1 single strand DNA binding protein Not tested ¥ÕSh1 Protein 1e-13 41