Gene Information

Name : CSE_15770 (CSE_15770)
Accession : YP_005473806.1
Strain : Caldisericum exile AZM16c01
Genome accession: NC_017096
Putative virulence/resistance : Resistance
Product : putative ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1550981 - 1551700 bp
Length : 720 bp
Strand : -
Note : -

DNA sequence : 
ATGCAATATTTAATTGAAGCAAGAAACCTTGTAAAGGTTTACAAATTGGGAGAAGTTGAAATTGAAGCACTAAGAGGTGT
TAGTTTAAACGTTCAAGAGGGAGAACTTATCTCAGTAATTGGGCCATCTGGCTCTGGAAAATCAACATTGATGCATATTT
TAGGTTGTCTTGATACACCAACGAGTGGTGAGTATCTTCTTGAAGGAGTTAATGTATCCAAACTCAGCGACTATGAGTTA
TCTCGTGTTAGGAACGAAAAAATAGGGTTTGTGTTTCAAACATTTAACCTTCTTTCGCATCTTACAGTGCTTGAGAATGT
CCTTTTGCCAGTGCAATACAACCCCAATGGAGATATTAAAAGTGCAACAAAAAGGGCATATGAACTTCTTGAAAAATTCG
GATTAAAAAATAGAGTTAGGAATAGGCCCACTCAACTTTCTGGTGGAGAGATGCAAAGGGTTGCAATTGCAAGGGCATTA
ATAAACAATCCTAAAATTCTTTTTGCAGATGAACCAACAGGAAACCTTGATTCAAAAACTGGCCTTGAAATTTTGAAGAT
ACTAAAAGAACTTCACAAGGAAGGCATGACGGAGGTAATAGTTACCCATGACCTTAATATCACAAGGTTCACAGAGAGGA
TTATAAAAATAAAGGATGGACTTATCGAGGGCGAGGAAGTTAATAGAGTTGTTTACGAAGTTGAGGAGGAAGGAATATGA

Protein sequence : 
MQYLIEARNLVKVYKLGEVEIEALRGVSLNVQEGELISVIGPSGSGKSTLMHILGCLDTPTSGEYLLEGVNVSKLSDYEL
SRVRNEKIGFVFQTFNLLSHLTVLENVLLPVQYNPNGDIKSATKRAYELLEKFGLKNRVRNRPTQLSGGEMQRVAIARAL
INNPKILFADEPTGNLDSKTGLEILKILKELHKEGMTEVIVTHDLNITRFTERIIKIKDGLIEGEEVNRVVYEVEEEGI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-31 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-32 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-32 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-32 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CSE_15770 YP_005473806.1 putative ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 3e-48 51
CSE_15770 YP_005473806.1 putative ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 3e-37 46
CSE_15770 YP_005473806.1 putative ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 2e-33 43
CSE_15770 YP_005473806.1 putative ABC transporter ATP-binding protein NC_012469.1.7685735. Protein 1e-32 43
CSE_15770 YP_005473806.1 putative ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 1e-34 41